Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.15□□□□□ -0.3
SNCAP37840 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.15□□□□□ -0.3
SNCAP37840 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
SNCAP37840 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.15□□□□□ -0.3
SNCAP37840 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNCAP37840 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNCAP37840 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
SNCAP37840 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.15□□□□□ -0.3
SNCAP37840 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNCAP37840 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SNCAP37840 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNCAP37840 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNCAP37840 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SNCAP37840 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.15□□□□□ -0.3
SNCAP37840 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNCAP37840 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SNCAP37840 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNCAP37840 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.15□□□□□ -0.3
SNCAP37840 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNCAP37840 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.15□□□□□ -0.3
SNCAP37840 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SNCAP37840 AC073648.2-201ENST00000510116 352 ntBASIC13.15□□□□□ -0.3
SNCAP37840 AC136632.2-201ENST00000512891 861 ntBASIC13.15□□□□□ -0.3
SNCAP37840 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.15□□□□□ -0.3
SNCAP37840 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.15□□□□□ -0.3
SNCAP37840 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.15□□□□□ -0.3
SNCAP37840 AC021087.4-201ENST00000563761 564 ntBASIC13.15□□□□□ -0.3
SNCAP37840 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SNCAP37840 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.15□□□□□ -0.3
SNCAP37840 AC025062.2-201ENST00000605477 670 ntBASIC13.15□□□□□ -0.3
SNCAP37840 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SNCAP37840 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNCAP37840 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNCAP37840 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SNCAP37840 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
SNCAP37840 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SNCAP37840 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNCAP37840 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNCAP37840 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNCAP37840 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.15□□□□□ -0.3
SNCAP37840 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNCAP37840 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNCAP37840 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.15□□□□□ -0.31
SNCAP37840 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SNCAP37840 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SNCAP37840 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SNCAP37840 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
SNCAP37840 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
SNCAP37840 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNCAP37840 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SNCAP37840 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SNCAP37840 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNCAP37840 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNCAP37840 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SNCAP37840 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.14□□□□□ -0.31
SNCAP37840 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNCAP37840 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNCAP37840 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.14□□□□□ -0.31
SNCAP37840 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNCAP37840 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNCAP37840 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SNCAP37840 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNCAP37840 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNCAP37840 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.14□□□□□ -0.31
SNCAP37840 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.14□□□□□ -0.31
SNCAP37840 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNCAP37840 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNCAP37840 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNCAP37840 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
SNCAP37840 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.14□□□□□ -0.31
SNCAP37840 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SNCAP37840 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.14□□□□□ -0.31
SNCAP37840 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNCAP37840 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SNCAP37840 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SNCAP37840 OR7E14P-202ENST00000530490 1290 ntBASIC13.14□□□□□ -0.31
SNCAP37840 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.14□□□□□ -0.31
SNCAP37840 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.14□□□□□ -0.31
SNCAP37840 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SNCAP37840 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.14□□□□□ -0.31
SNCAP37840 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNCAP37840 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SNCAP37840 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNCAP37840 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
SNCAP37840 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SNCAP37840 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SNCAP37840 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNCAP37840 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNCAP37840 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
SNCAP37840 AC087481.3-201ENST00000602886 1894 ntBASIC13.14□□□□□ -0.31
SNCAP37840 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNCAP37840 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.14□□□□□ -0.31
SNCAP37840 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SNCAP37840 AC013726.1-201ENST00000563747 2285 ntBASIC13.14□□□□□ -0.31
SNCAP37840 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
SNCAP37840 AC041040.2-201ENST00000622926 2899 ntBASIC13.14□□□□□ -0.31
SNCAP37840 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
SNCAP37840 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.13□□□□□ -0.31
SNCAP37840 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNCAP37840 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms