Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC11.75□□□□□ -0.53
CKS2P33552 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
CKS2P33552 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
CKS2P33552 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
CKS2P33552 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC11.75□□□□□ -0.53
CKS2P33552 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC11.75□□□□□ -0.53
CKS2P33552 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC11.75□□□□□ -0.53
CKS2P33552 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS2P33552 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS2P33552 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
CKS2P33552 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CKS2P33552 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS2P33552 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS2P33552 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS2P33552 ARMC10P1-201ENST00000313754 855 ntBASIC11.75□□□□□ -0.53
CKS2P33552 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
CKS2P33552 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC11.75□□□□□ -0.53
CKS2P33552 RCN1P2-201ENST00000398357 915 ntBASIC11.75□□□□□ -0.53
CKS2P33552 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CKS2P33552 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC11.75□□□□□ -0.53
CKS2P33552 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC11.75□□□□□ -0.53
CKS2P33552 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC11.75□□□□□ -0.53
CKS2P33552 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC11.75□□□□□ -0.53
CKS2P33552 AC087163.2-201ENST00000457299 853 ntBASIC11.75□□□□□ -0.53
CKS2P33552 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC11.75□□□□□ -0.53
CKS2P33552 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC11.75□□□□□ -0.53
CKS2P33552 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC11.75□□□□□ -0.53
CKS2P33552 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS2P33552 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC11.75□□□□□ -0.53
CKS2P33552 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CKS2P33552 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CKS2P33552 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS2P33552 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CKS2P33552 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS2P33552 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC11.75□□□□□ -0.53
CKS2P33552 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CKS2P33552 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS2P33552 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CKS2P33552 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS2P33552 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS2P33552 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS2P33552 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CKS2P33552 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS2P33552 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CKS2P33552 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS2P33552 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CKS2P33552 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CKS2P33552 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC11.75□□□□□ -0.53
CKS2P33552 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC11.75□□□□□ -0.53
CKS2P33552 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CKS2P33552 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CKS2P33552 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC11.75□□□□□ -0.53
CKS2P33552 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC11.75□□□□□ -0.53
CKS2P33552 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS2P33552 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS2P33552 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC11.74□□□□□ -0.53
CKS2P33552 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS2P33552 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC11.74□□□□□ -0.53
CKS2P33552 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS2P33552 SLC9A3P2-201ENST00000447821 2021 ntBASIC11.74□□□□□ -0.53
CKS2P33552 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS2P33552 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS2P33552 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CKS2P33552 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS2P33552 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS2P33552 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC11.74□□□□□ -0.53
CKS2P33552 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS2P33552 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CKS2P33552 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS2P33552 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CKS2P33552 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CKS2P33552 FGD5P1-202ENST00000614866 2498 ntBASIC11.74□□□□□ -0.53
CKS2P33552 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS2P33552 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
CKS2P33552 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC11.74□□□□□ -0.53
CKS2P33552 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
CKS2P33552 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
CKS2P33552 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CKS2P33552 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC11.74□□□□□ -0.53
CKS2P33552 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC11.74□□□□□ -0.53
CKS2P33552 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC11.74□□□□□ -0.53
CKS2P33552 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC11.74□□□□□ -0.53
CKS2P33552 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CKS2P33552 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC11.74□□□□□ -0.53
CKS2P33552 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC11.74□□□□□ -0.53
CKS2P33552 AP005901.3-202ENST00000581653 237 ntBASIC11.74□□□□□ -0.53
CKS2P33552 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS2P33552 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC11.74□□□□□ -0.53
CKS2P33552 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC11.74□□□□□ -0.53
CKS2P33552 AC083849.1-201ENST00000615227 514 ntBASIC11.74□□□□□ -0.53
CKS2P33552 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CKS2P33552 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC11.74□□□□□ -0.53
CKS2P33552 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CKS2P33552 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CKS2P33552 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS2P33552 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
CKS2P33552 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CKS2P33552 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
CKS2P33552 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS2P33552 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms