Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.71■□□□□ 0.11
VARSP26640 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VARSP26640 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
VARSP26640 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.71■□□□□ 0.11
VARSP26640 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VARSP26640 AC013268.4-201ENST00000637413 2228 ntBASIC15.71■□□□□ 0.1
VARSP26640 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
VARSP26640 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.71■□□□□ 0.1
VARSP26640 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
VARSP26640 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARSP26640 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARSP26640 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARSP26640 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARSP26640 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARSP26640 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARSP26640 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARSP26640 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.7■□□□□ 0.1
VARSP26640 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.7■□□□□ 0.1
VARSP26640 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARSP26640 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.7■□□□□ 0.1
VARSP26640 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.7■□□□□ 0.1
VARSP26640 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.7■□□□□ 0.1
VARSP26640 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARSP26640 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARSP26640 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC15.7■□□□□ 0.1
VARSP26640 AC004461.1-201ENST00000412461 403 ntBASIC15.7■□□□□ 0.1
VARSP26640 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
VARSP26640 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VARSP26640 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
VARSP26640 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.7■□□□□ 0.1
VARSP26640 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.7■□□□□ 0.1
VARSP26640 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.7■□□□□ 0.1
VARSP26640 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.7■□□□□ 0.1
VARSP26640 AC105233.2-201ENST00000523697 349 ntBASIC15.7■□□□□ 0.1
VARSP26640 AF228730.5-201ENST00000530288 346 ntBASIC15.7■□□□□ 0.1
VARSP26640 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARSP26640 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
VARSP26640 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.7■□□□□ 0.1
VARSP26640 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.7■□□□□ 0.1
VARSP26640 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.7■□□□□ 0.1
VARSP26640 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.7■□□□□ 0.1
VARSP26640 AC008267.7-201ENST00000624570 1194 ntBASIC15.7■□□□□ 0.1
VARSP26640 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.7■□□□□ 0.1
VARSP26640 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.7■□□□□ 0.1
VARSP26640 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARSP26640 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARSP26640 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARSP26640 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
VARSP26640 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.7■□□□□ 0.1
VARSP26640 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.7■□□□□ 0.1
VARSP26640 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARSP26640 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARSP26640 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VARSP26640 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.7■□□□□ 0.1
VARSP26640 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VARSP26640 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.69■□□□□ 0.1
VARSP26640 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VARSP26640 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VARSP26640 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.69■□□□□ 0.1
VARSP26640 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
VARSP26640 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
VARSP26640 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VARSP26640 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VARSP26640 AL139400.1-201ENST00000366220 510 ntBASIC15.69■□□□□ 0.1
VARSP26640 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.69■□□□□ 0.1
VARSP26640 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.69■□□□□ 0.1
VARSP26640 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
VARSP26640 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.69■□□□□ 0.1
VARSP26640 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VARSP26640 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.69■□□□□ 0.1
VARSP26640 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VARSP26640 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VARSP26640 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VARSP26640 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.69■□□□□ 0.1
VARSP26640 RN7SL275P-201ENST00000582762 335 ntBASIC15.69■□□□□ 0.1
VARSP26640 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.69■□□□□ 0.1
VARSP26640 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.69■□□□□ 0.1
VARSP26640 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VARSP26640 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
VARSP26640 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VARSP26640 AL122018.1-201ENST00000446607 2310 ntBASIC15.69■□□□□ 0.1
VARSP26640 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VARSP26640 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VARSP26640 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VARSP26640 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
VARSP26640 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
VARSP26640 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VARSP26640 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.69■□□□□ 0.1
VARSP26640 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
VARSP26640 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VARSP26640 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VARSP26640 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VARSP26640 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.68■□□□□ 0.1
VARSP26640 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VARSP26640 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VARSP26640 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
VARSP26640 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.68■□□□□ 0.1
VARSP26640 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
VARSP26640 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VARSP26640 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms