Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
KCNA3P22001 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KCNA3P22001 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KCNA3P22001 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KCNA3P22001 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
KCNA3P22001 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
KCNA3P22001 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
KCNA3P22001 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
KCNA3P22001 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KCNA3P22001 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
KCNA3P22001 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
KCNA3P22001 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
KCNA3P22001 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
KCNA3P22001 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC19.14■□□□□ 0.65
KCNA3P22001 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC19.14■□□□□ 0.65
KCNA3P22001 CMC1-204ENST00000423894 549 ntTSL 2 BASIC19.14■□□□□ 0.65
KCNA3P22001 RGS5-214ENST00000429865 754 ntTSL 3 BASIC19.14■□□□□ 0.65
KCNA3P22001 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
KCNA3P22001 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC19.14■□□□□ 0.65
KCNA3P22001 LY6E-208ENST00000520531 490 ntTSL 2 BASIC19.14■□□□□ 0.65
KCNA3P22001 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
KCNA3P22001 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC19.14■□□□□ 0.65
KCNA3P22001 AP001002.3-201ENST00000623482 206 ntBASIC19.14■□□□□ 0.65
KCNA3P22001 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
KCNA3P22001 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KCNA3P22001 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.14■□□□□ 0.65
KCNA3P22001 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KCNA3P22001 AC139713.2-201ENST00000641328 2723 ntBASIC19.14■□□□□ 0.65
KCNA3P22001 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KCNA3P22001 NOC2LP2-201ENST00000407594 1944 ntBASIC19.13■□□□□ 0.65
KCNA3P22001 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KCNA3P22001 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.13■□□□□ 0.65
KCNA3P22001 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KCNA3P22001 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KCNA3P22001 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
KCNA3P22001 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KCNA3P22001 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.13■□□□□ 0.65
KCNA3P22001 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KCNA3P22001 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KCNA3P22001 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
KCNA3P22001 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KCNA3P22001 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KCNA3P22001 AL354877.1-201ENST00000424412 413 ntBASIC19.13■□□□□ 0.65
KCNA3P22001 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
KCNA3P22001 CHMP1AP1-201ENST00000445563 662 ntBASIC19.13■□□□□ 0.65
KCNA3P22001 AC100850.1-201ENST00000506768 649 ntBASIC19.13■□□□□ 0.65
KCNA3P22001 NCK2-206ENST00000522586 490 ntTSL 5 BASIC19.13■□□□□ 0.65
KCNA3P22001 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC19.13■□□□□ 0.65
KCNA3P22001 RN7SL713P-201ENST00000582127 302 ntBASIC19.13■□□□□ 0.65
KCNA3P22001 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC19.13■□□□□ 0.65
KCNA3P22001 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
KCNA3P22001 AC100757.4-201ENST00000626934 759 ntBASIC19.13■□□□□ 0.65
KCNA3P22001 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC19.13■□□□□ 0.65
KCNA3P22001 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KCNA3P22001 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KCNA3P22001 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KCNA3P22001 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KCNA3P22001 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KCNA3P22001 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
KCNA3P22001 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.13■□□□□ 0.65
KCNA3P22001 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KCNA3P22001 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
KCNA3P22001 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNA3P22001 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
KCNA3P22001 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNA3P22001 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC19.12■□□□□ 0.65
KCNA3P22001 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNA3P22001 AC068880.1-201ENST00000507289 2297 ntBASIC19.12■□□□□ 0.65
KCNA3P22001 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNA3P22001 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNA3P22001 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNA3P22001 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNA3P22001 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
KCNA3P22001 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KCNA3P22001 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KCNA3P22001 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
KCNA3P22001 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
KCNA3P22001 NDUFAB1P1-201ENST00000404262 460 ntBASIC19.12■□□□□ 0.65
KCNA3P22001 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
KCNA3P22001 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC19.12■□□□□ 0.65
KCNA3P22001 OARD1-204ENST00000464633 717 ntTSL 2 BASIC19.12■□□□□ 0.65
KCNA3P22001 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC19.12■□□□□ 0.65
KCNA3P22001 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC19.12■□□□□ 0.65
KCNA3P22001 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC19.12■□□□□ 0.65
KCNA3P22001 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC19.12■□□□□ 0.65
KCNA3P22001 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
KCNA3P22001 AL161670.2-201ENST00000557650 1227 ntBASIC19.12■□□□□ 0.65
KCNA3P22001 TBCB-211ENST00000589996 724 ntTSL 3 BASIC19.12■□□□□ 0.65
KCNA3P22001 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC19.12■□□□□ 0.65
KCNA3P22001 AC026740.1-201ENST00000607068 791 ntBASIC19.12■□□□□ 0.65
KCNA3P22001 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNA3P22001 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNA3P22001 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNA3P22001 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
KCNA3P22001 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.12■□□□□ 0.65
KCNA3P22001 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNA3P22001 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
KCNA3P22001 AC018470.1-201ENST00000624790 3129 ntBASIC19.11■□□□□ 0.65
KCNA3P22001 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KCNA3P22001 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms