Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 AC099063.4-201ENST00000641099 1602 ntBASIC14.81□□□□□ -0.04
TNFRSF1BP20333 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TNFRSF1BP20333 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 SNX18-202ENST00000343017 3140 ntBASIC14.8□□□□□ -0.04
TNFRSF1BP20333 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 AP002472.1-201ENST00000577490 586 ntBASIC14.8□□□□□ -0.04
TNFRSF1BP20333 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 AC099522.2-201ENST00000607001 744 ntBASIC14.8□□□□□ -0.04
TNFRSF1BP20333 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 AL161645.1-201ENST00000622716 1255 ntBASIC14.8□□□□□ -0.04
TNFRSF1BP20333 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFRSF1BP20333 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.79□□□□□ -0.04
TNFRSF1BP20333 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 AC061975.2-201ENST00000581722 295 ntBASIC14.79□□□□□ -0.04
TNFRSF1BP20333 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 REXO1L1P-202ENST00000608646 1974 ntBASIC14.79□□□□□ -0.04
TNFRSF1BP20333 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TNFRSF1BP20333 AL009178.2-201ENST00000597278 2719 ntBASIC14.79□□□□□ -0.04
TNFRSF1BP20333 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFRSF1BP20333 AL161772.1-201ENST00000610494 4412 ntBASIC14.78□□□□□ -0.04
TNFRSF1BP20333 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms