Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2B1P20020 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2B1P20020 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2B1P20020 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2B1P20020 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2B1P20020 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ATP2B1P20020 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.37■□□□□ 0.53
ATP2B1P20020 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2B1P20020 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2B1P20020 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.37■□□□□ 0.53
ATP2B1P20020 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2B1P20020 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP2B1P20020 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.37■□□□□ 0.53
ATP2B1P20020 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2B1P20020 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2B1P20020 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2B1P20020 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2B1P20020 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2B1P20020 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2B1P20020 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.36■□□□□ 0.53
ATP2B1P20020 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2B1P20020 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2B1P20020 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
ATP2B1P20020 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ATP2B1P20020 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.36■□□□□ 0.53
ATP2B1P20020 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.36■□□□□ 0.53
ATP2B1P20020 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.36■□□□□ 0.53
ATP2B1P20020 SPDYE14P-201ENST00000442619 822 ntBASIC18.36■□□□□ 0.53
ATP2B1P20020 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.36■□□□□ 0.53
ATP2B1P20020 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.36■□□□□ 0.53
ATP2B1P20020 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2B1P20020 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.36■□□□□ 0.53
ATP2B1P20020 AP001282.1-201ENST00000531301 1499 ntBASIC18.36■□□□□ 0.53
ATP2B1P20020 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2B1P20020 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
ATP2B1P20020 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2B1P20020 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2B1P20020 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.36■□□□□ 0.53
ATP2B1P20020 AC018529.1-201ENST00000613063 361 ntBASIC18.36■□□□□ 0.53
ATP2B1P20020 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.36■□□□□ 0.53
ATP2B1P20020 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
ATP2B1P20020 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ATP2B1P20020 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2B1P20020 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.36■□□□□ 0.53
ATP2B1P20020 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2B1P20020 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2B1P20020 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP2B1P20020 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP2B1P20020 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2B1P20020 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2B1P20020 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP2B1P20020 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2B1P20020 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2B1P20020 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.35■□□□□ 0.53
ATP2B1P20020 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
ATP2B1P20020 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2B1P20020 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.35■□□□□ 0.53
ATP2B1P20020 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2B1P20020 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2B1P20020 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
ATP2B1P20020 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
ATP2B1P20020 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ATP2B1P20020 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.35■□□□□ 0.53
ATP2B1P20020 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP2B1P20020 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP2B1P20020 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.35■□□□□ 0.53
ATP2B1P20020 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.35■□□□□ 0.53
ATP2B1P20020 AC243562.2-201ENST00000561247 970 ntBASIC18.35■□□□□ 0.53
ATP2B1P20020 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.35■□□□□ 0.53
ATP2B1P20020 MIR4453-201ENST00000584019 89 ntBASIC18.35■□□□□ 0.53
ATP2B1P20020 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.35■□□□□ 0.53
ATP2B1P20020 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.35■□□□□ 0.53
ATP2B1P20020 AC009093.7-201ENST00000623853 1223 ntBASIC18.35■□□□□ 0.53
ATP2B1P20020 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.35■□□□□ 0.53
ATP2B1P20020 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP2B1P20020 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2B1P20020 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ATP2B1P20020 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2B1P20020 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2B1P20020 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2B1P20020 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2B1P20020 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP2B1P20020 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP2B1P20020 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2B1P20020 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.35■□□□□ 0.53
ATP2B1P20020 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
ATP2B1P20020 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B1P20020 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ATP2B1P20020 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B1P20020 AC023824.1-201ENST00000562945 2975 ntBASIC18.34■□□□□ 0.53
ATP2B1P20020 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B1P20020 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B1P20020 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B1P20020 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B1P20020 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ATP2B1P20020 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B1P20020 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B1P20020 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B1P20020 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2B1P20020 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms