Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.39■□□□□ 0.53
ERCC3P19447 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ERCC3P19447 MIR4259-201ENST00000584466 101 ntBASIC18.39■□□□□ 0.53
ERCC3P19447 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.39■□□□□ 0.53
ERCC3P19447 LINC01115-203ENST00000606068 577 ntBASIC18.39■□□□□ 0.53
ERCC3P19447 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC3P19447 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.39■□□□□ 0.53
ERCC3P19447 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.39■□□□□ 0.53
ERCC3P19447 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC3P19447 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC3P19447 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC3P19447 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC3P19447 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC3P19447 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.39■□□□□ 0.53
ERCC3P19447 AL691432.1-201ENST00000596308 1422 ntBASIC18.39■□□□□ 0.53
ERCC3P19447 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC3P19447 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC3P19447 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ERCC3P19447 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC3P19447 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC3P19447 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
ERCC3P19447 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC3P19447 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC3P19447 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.38■□□□□ 0.53
ERCC3P19447 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.38■□□□□ 0.53
ERCC3P19447 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.38■□□□□ 0.53
ERCC3P19447 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC3P19447 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.38■□□□□ 0.53
ERCC3P19447 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
ERCC3P19447 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.38■□□□□ 0.53
ERCC3P19447 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.38■□□□□ 0.53
ERCC3P19447 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC3P19447 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC3P19447 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.38■□□□□ 0.53
ERCC3P19447 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.38■□□□□ 0.53
ERCC3P19447 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ERCC3P19447 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC3P19447 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.38■□□□□ 0.53
ERCC3P19447 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC3P19447 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC3P19447 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ERCC3P19447 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ERCC3P19447 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.38■□□□□ 0.53
ERCC3P19447 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.38■□□□□ 0.53
ERCC3P19447 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
ERCC3P19447 AC008735.3-201ENST00000596646 500 ntBASIC18.38■□□□□ 0.53
ERCC3P19447 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC3P19447 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.38■□□□□ 0.53
ERCC3P19447 AC103702.1-201ENST00000548801 2630 ntBASIC18.38■□□□□ 0.53
ERCC3P19447 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.38■□□□□ 0.53
ERCC3P19447 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.38■□□□□ 0.53
ERCC3P19447 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC3P19447 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC3P19447 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.38■□□□□ 0.53
ERCC3P19447 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ERCC3P19447 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
ERCC3P19447 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ERCC3P19447 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ERCC3P19447 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.38■□□□□ 0.53
ERCC3P19447 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC3P19447 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC3P19447 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC3P19447 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC3P19447 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC3P19447 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC3P19447 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.37■□□□□ 0.53
ERCC3P19447 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ERCC3P19447 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ERCC3P19447 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.37■□□□□ 0.53
ERCC3P19447 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC3P19447 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC3P19447 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ERCC3P19447 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC3P19447 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC3P19447 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.37■□□□□ 0.53
ERCC3P19447 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC3P19447 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.37■□□□□ 0.53
ERCC3P19447 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC3P19447 AC119751.2-201ENST00000504529 210 ntBASIC18.37■□□□□ 0.53
ERCC3P19447 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ERCC3P19447 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.37■□□□□ 0.53
ERCC3P19447 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ERCC3P19447 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ERCC3P19447 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.37■□□□□ 0.53
ERCC3P19447 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC3P19447 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
ERCC3P19447 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ERCC3P19447 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC3P19447 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC3P19447 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC3P19447 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC3P19447 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.37■□□□□ 0.53
ERCC3P19447 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC3P19447 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.37■□□□□ 0.53
ERCC3P19447 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC3P19447 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.37■□□□□ 0.53
ERCC3P19447 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
ERCC3P19447 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC3P19447 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.37■□□□□ 0.53
ERCC3P19447 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms