Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14□□□□□ -0.17
ATF1P18846 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14□□□□□ -0.17
ATF1P18846 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ATF1P18846 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ATF1P18846 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ATF1P18846 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
ATF1P18846 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14□□□□□ -0.17
ATF1P18846 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14□□□□□ -0.17
ATF1P18846 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ATF1P18846 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ATF1P18846 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ATF1P18846 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14□□□□□ -0.17
ATF1P18846 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
ATF1P18846 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
ATF1P18846 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.99□□□□□ -0.17
ATF1P18846 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATF1P18846 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.99□□□□□ -0.17
ATF1P18846 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.99□□□□□ -0.17
ATF1P18846 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
ATF1P18846 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
ATF1P18846 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.99□□□□□ -0.17
ATF1P18846 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATF1P18846 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.99□□□□□ -0.17
ATF1P18846 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
ATF1P18846 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATF1P18846 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATF1P18846 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATF1P18846 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATF1P18846 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATF1P18846 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATF1P18846 MRPL3P1-201ENST00000400109 1033 ntBASIC13.99□□□□□ -0.17
ATF1P18846 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.99□□□□□ -0.17
ATF1P18846 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
ATF1P18846 AC026396.1-201ENST00000419388 421 ntBASIC13.99□□□□□ -0.17
ATF1P18846 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.99□□□□□ -0.17
ATF1P18846 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.99□□□□□ -0.17
ATF1P18846 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.99□□□□□ -0.17
ATF1P18846 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATF1P18846 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.99□□□□□ -0.17
ATF1P18846 IGHV3-22-201ENST00000520721 359 ntBASIC13.99□□□□□ -0.17
ATF1P18846 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.99□□□□□ -0.17
ATF1P18846 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.99□□□□□ -0.17
ATF1P18846 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATF1P18846 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.99□□□□□ -0.17
ATF1P18846 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.99□□□□□ -0.17
ATF1P18846 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATF1P18846 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATF1P18846 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATF1P18846 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.99□□□□□ -0.17
ATF1P18846 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.99□□□□□ -0.17
ATF1P18846 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
ATF1P18846 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATF1P18846 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.99□□□□□ -0.17
ATF1P18846 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
ATF1P18846 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATF1P18846 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.99□□□□□ -0.17
ATF1P18846 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ATF1P18846 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ATF1P18846 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.99□□□□□ -0.17
ATF1P18846 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATF1P18846 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ATF1P18846 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.98□□□□□ -0.17
ATF1P18846 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ATF1P18846 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATF1P18846 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATF1P18846 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATF1P18846 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ATF1P18846 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATF1P18846 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ATF1P18846 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ATF1P18846 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.98□□□□□ -0.17
ATF1P18846 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ATF1P18846 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.98□□□□□ -0.17
ATF1P18846 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATF1P18846 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ATF1P18846 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
ATF1P18846 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATF1P18846 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATF1P18846 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATF1P18846 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.98□□□□□ -0.17
ATF1P18846 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATF1P18846 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATF1P18846 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATF1P18846 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ATF1P18846 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ATF1P18846 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.98□□□□□ -0.17
ATF1P18846 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
ATF1P18846 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.98□□□□□ -0.17
ATF1P18846 AC245100.5-201ENST00000452108 331 ntBASIC13.98□□□□□ -0.17
ATF1P18846 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.98□□□□□ -0.17
ATF1P18846 RNA5SP419-201ENST00000515908 135 ntBASIC13.98□□□□□ -0.17
ATF1P18846 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.98□□□□□ -0.17
ATF1P18846 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ATF1P18846 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.98□□□□□ -0.17
ATF1P18846 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
ATF1P18846 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.98□□□□□ -0.17
ATF1P18846 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ATF1P18846 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.98□□□□□ -0.17
ATF1P18846 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ATF1P18846 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms