Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC130P13994 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC130P13994 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC130P13994 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC130P13994 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC130P13994 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC130P13994 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CCDC130P13994 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC130P13994 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC130P13994 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CCDC130P13994 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CCDC130P13994 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC130P13994 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC130P13994 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC130P13994 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC130P13994 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC130P13994 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC130P13994 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC130P13994 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC130P13994 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC130P13994 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
CCDC130P13994 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC130P13994 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC130P13994 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC130P13994 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CCDC130P13994 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC130P13994 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC130P13994 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC130P13994 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC130P13994 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC130P13994 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.8■□□□□ 0.28
CCDC130P13994 KRT18P64-201ENST00000434946 1219 ntBASIC16.8■□□□□ 0.28
CCDC130P13994 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCDC130P13994 TERF1P3-201ENST00000505638 1227 ntBASIC16.8■□□□□ 0.28
CCDC130P13994 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC130P13994 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC130P13994 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.8■□□□□ 0.28
CCDC130P13994 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
CCDC130P13994 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC130P13994 SRD5A3P1-201ENST00000603021 949 ntBASIC16.8■□□□□ 0.28
CCDC130P13994 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CCDC130P13994 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCDC130P13994 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCDC130P13994 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC130P13994 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CCDC130P13994 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC130P13994 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC130P13994 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC130P13994 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC130P13994 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC130P13994 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC130P13994 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC130P13994 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC130P13994 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC130P13994 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
CCDC130P13994 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC130P13994 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
CCDC130P13994 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC130P13994 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CCDC130P13994 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC130P13994 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC130P13994 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC130P13994 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CCDC130P13994 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC130P13994 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC130P13994 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCDC130P13994 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC130P13994 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC130P13994 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC130P13994 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC130P13994 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC130P13994 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC130P13994 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC130P13994 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC130P13994 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC130P13994 SPDYE19P-201ENST00000338590 713 ntBASIC16.79■□□□□ 0.28
CCDC130P13994 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC130P13994 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC130P13994 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CCDC130P13994 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC130P13994 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
CCDC130P13994 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC130P13994 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC130P13994 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC130P13994 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.79■□□□□ 0.28
CCDC130P13994 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC130P13994 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
CCDC130P13994 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC130P13994 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC130P13994 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
CCDC130P13994 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC130P13994 AC138761.1-201ENST00000584393 385 ntBASIC16.79■□□□□ 0.28
CCDC130P13994 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC130P13994 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC130P13994 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC130P13994 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC130P13994 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC130P13994 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC130P13994 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC130P13994 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms