Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.56■□□□□ 0.08
PCNAP12004 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.56■□□□□ 0.08
PCNAP12004 AP000842.3-202ENST00000569238 1080 ntBASIC15.56■□□□□ 0.08
PCNAP12004 MIR3687-2-201ENST00000577708 61 ntBASIC15.56■□□□□ 0.08
PCNAP12004 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCNAP12004 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PCNAP12004 MIR3687-1-201ENST00000614492 61 ntBASIC15.56■□□□□ 0.08
PCNAP12004 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.56■□□□□ 0.08
PCNAP12004 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PCNAP12004 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCNAP12004 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
PCNAP12004 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCNAP12004 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCNAP12004 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.56■□□□□ 0.08
PCNAP12004 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCNAP12004 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PCNAP12004 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.56■□□□□ 0.08
PCNAP12004 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCNAP12004 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCNAP12004 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCNAP12004 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCNAP12004 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PCNAP12004 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCNAP12004 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PCNAP12004 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCNAP12004 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCNAP12004 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PCNAP12004 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCNAP12004 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.55■□□□□ 0.08
PCNAP12004 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.55■□□□□ 0.08
PCNAP12004 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCNAP12004 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.55■□□□□ 0.08
PCNAP12004 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PCNAP12004 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCNAP12004 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCNAP12004 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.55■□□□□ 0.08
PCNAP12004 AC008677.1-201ENST00000519230 1561 ntBASIC15.55■□□□□ 0.08
PCNAP12004 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
PCNAP12004 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.55■□□□□ 0.08
PCNAP12004 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.55■□□□□ 0.08
PCNAP12004 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCNAP12004 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCNAP12004 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCNAP12004 BX842568.4-201ENST00000421222 227 ntBASIC15.55■□□□□ 0.08
PCNAP12004 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCNAP12004 AC142381.1-201ENST00000426099 345 ntBASIC15.55■□□□□ 0.08
PCNAP12004 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCNAP12004 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCNAP12004 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.55■□□□□ 0.08
PCNAP12004 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.55■□□□□ 0.08
PCNAP12004 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCNAP12004 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.55■□□□□ 0.08
PCNAP12004 MIR4469-201ENST00000583919 79 ntBASIC15.55■□□□□ 0.08
PCNAP12004 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCNAP12004 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.55■□□□□ 0.08
PCNAP12004 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.55■□□□□ 0.08
PCNAP12004 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.55■□□□□ 0.08
PCNAP12004 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
PCNAP12004 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCNAP12004 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCNAP12004 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCNAP12004 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
PCNAP12004 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCNAP12004 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.55■□□□□ 0.08
PCNAP12004 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCNAP12004 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
PCNAP12004 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PCNAP12004 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCNAP12004 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.55■□□□□ 0.08
PCNAP12004 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCNAP12004 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCNAP12004 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.54■□□□□ 0.08
PCNAP12004 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCNAP12004 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCNAP12004 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCNAP12004 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCNAP12004 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCNAP12004 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCNAP12004 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.54■□□□□ 0.08
PCNAP12004 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
PCNAP12004 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCNAP12004 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCNAP12004 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCNAP12004 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
PCNAP12004 GPX1P2-201ENST00000429271 606 ntBASIC15.54■□□□□ 0.08
PCNAP12004 AC005237.2-201ENST00000434368 219 ntBASIC15.54■□□□□ 0.08
PCNAP12004 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.54■□□□□ 0.08
PCNAP12004 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.54■□□□□ 0.08
PCNAP12004 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.54■□□□□ 0.08
PCNAP12004 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PCNAP12004 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PCNAP12004 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.54■□□□□ 0.08
PCNAP12004 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCNAP12004 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.54■□□□□ 0.08
PCNAP12004 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PCNAP12004 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.54■□□□□ 0.08
PCNAP12004 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCNAP12004 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCNAP12004 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCNAP12004 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms