Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 AC069224.1-201ENST00000566372 1715 ntBASIC16.02■□□□□ 0.15
THRAP10827 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
THRAP10827 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
THRAP10827 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.02■□□□□ 0.15
THRAP10827 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
THRAP10827 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
THRAP10827 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
THRAP10827 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
THRAP10827 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
THRAP10827 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
THRAP10827 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
THRAP10827 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.01■□□□□ 0.15
THRAP10827 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.01■□□□□ 0.15
THRAP10827 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
THRAP10827 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
THRAP10827 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
THRAP10827 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
THRAP10827 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.01■□□□□ 0.15
THRAP10827 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.01■□□□□ 0.15
THRAP10827 BASP1P1-201ENST00000430708 665 ntBASIC16.01■□□□□ 0.15
THRAP10827 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.01■□□□□ 0.15
THRAP10827 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.01■□□□□ 0.15
THRAP10827 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
THRAP10827 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.01■□□□□ 0.15
THRAP10827 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.01■□□□□ 0.15
THRAP10827 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.01■□□□□ 0.15
THRAP10827 MIR4745-201ENST00000577608 62 ntBASIC16.01■□□□□ 0.15
THRAP10827 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.01■□□□□ 0.15
THRAP10827 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.01■□□□□ 0.15
THRAP10827 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
THRAP10827 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
THRAP10827 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
THRAP10827 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
THRAP10827 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.01■□□□□ 0.15
THRAP10827 PPT1-215ENST00000641471 2368 ntBASIC16.01■□□□□ 0.15
THRAP10827 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
THRAP10827 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
THRAP10827 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.01■□□□□ 0.15
THRAP10827 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.01■□□□□ 0.15
THRAP10827 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
THRAP10827 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.01■□□□□ 0.15
THRAP10827 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
THRAP10827 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
THRAP10827 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.01■□□□□ 0.15
THRAP10827 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
THRAP10827 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
THRAP10827 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16■□□□□ 0.15
THRAP10827 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
THRAP10827 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
THRAP10827 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16■□□□□ 0.15
THRAP10827 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
THRAP10827 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
THRAP10827 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
THRAP10827 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
THRAP10827 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
THRAP10827 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16■□□□□ 0.15
THRAP10827 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
THRAP10827 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
THRAP10827 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
THRAP10827 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16■□□□□ 0.15
THRAP10827 AC023157.3-201ENST00000619086 2088 ntBASIC16■□□□□ 0.15
THRAP10827 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16■□□□□ 0.15
THRAP10827 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16■□□□□ 0.15
THRAP10827 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
THRAP10827 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
THRAP10827 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16■□□□□ 0.15
THRAP10827 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16■□□□□ 0.15
THRAP10827 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
THRAP10827 MIR648-201ENST00000385046 94 ntBASIC16■□□□□ 0.15
THRAP10827 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16■□□□□ 0.15
THRAP10827 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16■□□□□ 0.15
THRAP10827 ALG1L8P-201ENST00000533887 760 ntBASIC16■□□□□ 0.15
THRAP10827 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16■□□□□ 0.15
THRAP10827 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16■□□□□ 0.15
THRAP10827 MIR6080-201ENST00000617359 66 ntBASIC16■□□□□ 0.15
THRAP10827 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
THRAP10827 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
THRAP10827 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
THRAP10827 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16■□□□□ 0.15
THRAP10827 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
THRAP10827 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16■□□□□ 0.15
THRAP10827 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16■□□□□ 0.15
THRAP10827 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16■□□□□ 0.15
THRAP10827 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
THRAP10827 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
THRAP10827 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
THRAP10827 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
THRAP10827 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
THRAP10827 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
THRAP10827 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
THRAP10827 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
THRAP10827 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
THRAP10827 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
THRAP10827 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
THRAP10827 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
THRAP10827 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.99■□□□□ 0.15
THRAP10827 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
THRAP10827 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
THRAP10827 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
THRAP10827 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms