Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.7■□□□□ 0.26
RARAP10276 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RARAP10276 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RARAP10276 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RARAP10276 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RARAP10276 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RARAP10276 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RARAP10276 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RARAP10276 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RARAP10276 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.7■□□□□ 0.26
RARAP10276 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.7■□□□□ 0.26
RARAP10276 AC009090.5-201ENST00000624886 2285 ntBASIC16.7■□□□□ 0.26
RARAP10276 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RARAP10276 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RARAP10276 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.69■□□□□ 0.26
RARAP10276 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RARAP10276 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.69■□□□□ 0.26
RARAP10276 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RARAP10276 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RARAP10276 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.69■□□□□ 0.26
RARAP10276 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RARAP10276 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RARAP10276 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RARAP10276 AC004987.2-201ENST00000395959 1148 ntBASIC16.69■□□□□ 0.26
RARAP10276 KRT18P32-201ENST00000424695 1287 ntBASIC16.69■□□□□ 0.26
RARAP10276 AP000344.2-201ENST00000512987 629 ntBASIC16.69■□□□□ 0.26
RARAP10276 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RARAP10276 ALG1L8P-201ENST00000533887 760 ntBASIC16.69■□□□□ 0.26
RARAP10276 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.69■□□□□ 0.26
RARAP10276 AC092865.5-201ENST00000545435 363 ntBASIC16.69■□□□□ 0.26
RARAP10276 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.69■□□□□ 0.26
RARAP10276 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.69■□□□□ 0.26
RARAP10276 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.69■□□□□ 0.26
RARAP10276 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RARAP10276 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.69■□□□□ 0.26
RARAP10276 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.69■□□□□ 0.26
RARAP10276 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.69■□□□□ 0.26
RARAP10276 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RARAP10276 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
RARAP10276 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RARAP10276 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RARAP10276 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
RARAP10276 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RARAP10276 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RARAP10276 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RARAP10276 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RARAP10276 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RARAP10276 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RARAP10276 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RARAP10276 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RARAP10276 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RARAP10276 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RARAP10276 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RARAP10276 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RARAP10276 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RARAP10276 AL009178.2-201ENST00000597278 2719 ntBASIC16.69■□□□□ 0.26
RARAP10276 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.69■□□□□ 0.26
RARAP10276 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RARAP10276 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.68■□□□□ 0.26
RARAP10276 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.68■□□□□ 0.26
RARAP10276 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RARAP10276 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RARAP10276 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RARAP10276 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RARAP10276 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RARAP10276 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
RARAP10276 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RARAP10276 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.68■□□□□ 0.26
RARAP10276 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.68■□□□□ 0.26
RARAP10276 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RARAP10276 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RARAP10276 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RARAP10276 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RARAP10276 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RARAP10276 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.68■□□□□ 0.26
RARAP10276 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.68■□□□□ 0.26
RARAP10276 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.68■□□□□ 0.26
RARAP10276 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.68■□□□□ 0.26
RARAP10276 GPS2P2-201ENST00000430745 888 ntBASIC16.68■□□□□ 0.26
RARAP10276 AL139010.1-201ENST00000454878 894 ntBASIC16.68■□□□□ 0.26
RARAP10276 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.68■□□□□ 0.26
RARAP10276 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.68■□□□□ 0.26
RARAP10276 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.68■□□□□ 0.26
RARAP10276 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.68■□□□□ 0.26
RARAP10276 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.68■□□□□ 0.26
RARAP10276 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.68■□□□□ 0.26
RARAP10276 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RARAP10276 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RARAP10276 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RARAP10276 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RARAP10276 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
RARAP10276 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RARAP10276 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RARAP10276 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.68■□□□□ 0.26
RARAP10276 CYP4F24P-201ENST00000586049 1580 ntBASIC16.68■□□□□ 0.26
RARAP10276 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RARAP10276 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RARAP10276 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RARAP10276 REXO1L1P-202ENST00000608646 1974 ntBASIC16.68■□□□□ 0.26
RARAP10276 AC112693.3-201ENST00000624819 1983 ntBASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms