Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.93■□□□□ 0.14
MMP2P08253 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
MMP2P08253 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MMP2P08253 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MMP2P08253 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MMP2P08253 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.93■□□□□ 0.14
MMP2P08253 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP2P08253 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP2P08253 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MMP2P08253 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP2P08253 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
MMP2P08253 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
MMP2P08253 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MMP2P08253 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP2P08253 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP2P08253 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
MMP2P08253 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP2P08253 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP2P08253 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.92■□□□□ 0.14
MMP2P08253 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP2P08253 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.92■□□□□ 0.14
MMP2P08253 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.92■□□□□ 0.14
MMP2P08253 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MMP2P08253 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MMP2P08253 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.92■□□□□ 0.14
MMP2P08253 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP2P08253 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.92■□□□□ 0.14
MMP2P08253 BASP1P1-201ENST00000430708 665 ntBASIC15.92■□□□□ 0.14
MMP2P08253 UGT1A2P-201ENST00000454886 866 ntBASIC15.92■□□□□ 0.14
MMP2P08253 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.92■□□□□ 0.14
MMP2P08253 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.92■□□□□ 0.14
MMP2P08253 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.92■□□□□ 0.14
MMP2P08253 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MMP2P08253 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.92■□□□□ 0.14
MMP2P08253 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.92■□□□□ 0.14
MMP2P08253 AC004790.1-201ENST00000612686 536 ntBASIC15.92■□□□□ 0.14
MMP2P08253 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP2P08253 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP2P08253 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.92■□□□□ 0.14
MMP2P08253 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP2P08253 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MMP2P08253 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.92■□□□□ 0.14
MMP2P08253 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.92■□□□□ 0.14
MMP2P08253 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.92■□□□□ 0.14
MMP2P08253 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MMP2P08253 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP2P08253 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MMP2P08253 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MMP2P08253 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.91■□□□□ 0.14
MMP2P08253 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP2P08253 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.91■□□□□ 0.14
MMP2P08253 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
MMP2P08253 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.91■□□□□ 0.14
MMP2P08253 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MMP2P08253 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MMP2P08253 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.91■□□□□ 0.14
MMP2P08253 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP2P08253 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP2P08253 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP2P08253 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
MMP2P08253 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP2P08253 AC073347.1-201ENST00000421633 2643 ntBASIC15.91■□□□□ 0.14
MMP2P08253 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.91■□□□□ 0.14
MMP2P08253 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.91■□□□□ 0.14
MMP2P08253 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP2P08253 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.91■□□□□ 0.14
MMP2P08253 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.91■□□□□ 0.14
MMP2P08253 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.91■□□□□ 0.14
MMP2P08253 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.91■□□□□ 0.14
MMP2P08253 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP2P08253 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
MMP2P08253 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP2P08253 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
MMP2P08253 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP2P08253 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MMP2P08253 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MMP2P08253 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.91■□□□□ 0.14
MMP2P08253 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.91■□□□□ 0.14
MMP2P08253 AC015922.1-201ENST00000421102 1152 ntBASIC15.91■□□□□ 0.14
MMP2P08253 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.91■□□□□ 0.14
MMP2P08253 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.91■□□□□ 0.14
MMP2P08253 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.91■□□□□ 0.14
MMP2P08253 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
MMP2P08253 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.91■□□□□ 0.14
MMP2P08253 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.91■□□□□ 0.14
MMP2P08253 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP2P08253 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.91■□□□□ 0.14
MMP2P08253 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MMP2P08253 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP2P08253 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.91■□□□□ 0.14
MMP2P08253 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.91■□□□□ 0.14
MMP2P08253 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
MMP2P08253 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.91■□□□□ 0.14
MMP2P08253 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MMP2P08253 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
MMP2P08253 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.91■□□□□ 0.14
MMP2P08253 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.91■□□□□ 0.14
MMP2P08253 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
MMP2P08253 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP2P08253 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms