Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.19
MT-ND3P03897 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.27■□□□□ 0.19
MT-ND3P03897 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
MT-ND3P03897 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
MT-ND3P03897 AC138035.3-201ENST00000622706 2791 ntBASIC16.26■□□□□ 0.19
MT-ND3P03897 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND3P03897 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
MT-ND3P03897 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND3P03897 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND3P03897 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND3P03897 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND3P03897 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND3P03897 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND3P03897 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.26■□□□□ 0.19
MT-ND3P03897 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND3P03897 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND3P03897 KRT18P28-201ENST00000453838 1332 ntBASIC16.26■□□□□ 0.19
MT-ND3P03897 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.26■□□□□ 0.19
MT-ND3P03897 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.26■□□□□ 0.19
MT-ND3P03897 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND3P03897 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.26■□□□□ 0.19
MT-ND3P03897 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.26■□□□□ 0.19
MT-ND3P03897 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MT-ND3P03897 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.26■□□□□ 0.19
MT-ND3P03897 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.26■□□□□ 0.19
MT-ND3P03897 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.26■□□□□ 0.19
MT-ND3P03897 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.26■□□□□ 0.19
MT-ND3P03897 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.26■□□□□ 0.19
MT-ND3P03897 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.26■□□□□ 0.19
MT-ND3P03897 OR2I1P-210ENST00000642037 4691 ntBASIC16.26■□□□□ 0.19
MT-ND3P03897 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.26■□□□□ 0.19
MT-ND3P03897 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.26■□□□□ 0.19
MT-ND3P03897 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND3P03897 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
MT-ND3P03897 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.26■□□□□ 0.19
MT-ND3P03897 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND3P03897 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
MT-ND3P03897 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MT-ND3P03897 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.26■□□□□ 0.19
MT-ND3P03897 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.26■□□□□ 0.19
MT-ND3P03897 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND3P03897 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
MT-ND3P03897 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MT-ND3P03897 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND3P03897 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.25■□□□□ 0.19
MT-ND3P03897 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
MT-ND3P03897 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND3P03897 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.25■□□□□ 0.19
MT-ND3P03897 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
MT-ND3P03897 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
MT-ND3P03897 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
MT-ND3P03897 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND3P03897 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND3P03897 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND3P03897 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
MT-ND3P03897 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND3P03897 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND3P03897 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.25■□□□□ 0.19
MT-ND3P03897 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND3P03897 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND3P03897 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.25■□□□□ 0.19
MT-ND3P03897 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.25■□□□□ 0.19
MT-ND3P03897 AL031055.1-201ENST00000606362 631 ntBASIC16.25■□□□□ 0.19
MT-ND3P03897 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.25■□□□□ 0.19
MT-ND3P03897 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND3P03897 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.25■□□□□ 0.19
MT-ND3P03897 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND3P03897 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND3P03897 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND3P03897 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.25■□□□□ 0.19
MT-ND3P03897 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.25■□□□□ 0.19
MT-ND3P03897 OR2I1P-209ENST00000641730 5365 ntBASIC16.25■□□□□ 0.19
MT-ND3P03897 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND3P03897 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
MT-ND3P03897 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND3P03897 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND3P03897 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND3P03897 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND3P03897 AC011477.6-201ENST00000604980 1927 ntBASIC16.25■□□□□ 0.19
MT-ND3P03897 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND3P03897 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND3P03897 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.25■□□□□ 0.19
MT-ND3P03897 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND3P03897 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND3P03897 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND3P03897 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.24■□□□□ 0.19
MT-ND3P03897 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND3P03897 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.24■□□□□ 0.19
MT-ND3P03897 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND3P03897 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND3P03897 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND3P03897 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND3P03897 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
MT-ND3P03897 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.24■□□□□ 0.19
MT-ND3P03897 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.24■□□□□ 0.19
MT-ND3P03897 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.24■□□□□ 0.19
MT-ND3P03897 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND3P03897 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND3P03897 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND3P03897 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms