Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TIMP1P01033 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.9■□□□□ 0.3
TIMP1P01033 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.9■□□□□ 0.3
TIMP1P01033 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.9■□□□□ 0.3
TIMP1P01033 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.9■□□□□ 0.3
TIMP1P01033 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.9■□□□□ 0.3
TIMP1P01033 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.9■□□□□ 0.3
TIMP1P01033 PPY2P-201ENST00000582808 702 ntBASIC16.9■□□□□ 0.3
TIMP1P01033 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TIMP1P01033 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.9■□□□□ 0.3
TIMP1P01033 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
TIMP1P01033 AC091544.8-201ENST00000619490 361 ntBASIC16.9■□□□□ 0.3
TIMP1P01033 AC079336.7-201ENST00000623428 1078 ntBASIC16.9■□□□□ 0.3
TIMP1P01033 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.9■□□□□ 0.3
TIMP1P01033 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.9■□□□□ 0.3
TIMP1P01033 LRRC59-203ENST00000576448 1531 ntBASIC16.9■□□□□ 0.3
TIMP1P01033 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TIMP1P01033 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
TIMP1P01033 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.3
TIMP1P01033 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TIMP1P01033 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP1P01033 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.89■□□□□ 0.29
TIMP1P01033 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP1P01033 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.89■□□□□ 0.29
TIMP1P01033 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.89■□□□□ 0.29
TIMP1P01033 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.89■□□□□ 0.29
TIMP1P01033 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP1P01033 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.89■□□□□ 0.29
TIMP1P01033 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.89■□□□□ 0.29
TIMP1P01033 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.89■□□□□ 0.29
TIMP1P01033 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP1P01033 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP1P01033 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP1P01033 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.89■□□□□ 0.29
TIMP1P01033 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP1P01033 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.89■□□□□ 0.29
TIMP1P01033 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP1P01033 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP1P01033 RPL17P11-201ENST00000417593 544 ntBASIC16.89■□□□□ 0.29
TIMP1P01033 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TIMP1P01033 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP1P01033 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP1P01033 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.89■□□□□ 0.29
TIMP1P01033 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.89■□□□□ 0.29
TIMP1P01033 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
TIMP1P01033 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.89■□□□□ 0.29
TIMP1P01033 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.89■□□□□ 0.29
TIMP1P01033 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.89■□□□□ 0.29
TIMP1P01033 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP1P01033 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TIMP1P01033 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.89■□□□□ 0.29
TIMP1P01033 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP1P01033 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TIMP1P01033 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP1P01033 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP1P01033 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TIMP1P01033 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP1P01033 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP1P01033 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TIMP1P01033 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP1P01033 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP1P01033 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP1P01033 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TIMP1P01033 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.88■□□□□ 0.29
TIMP1P01033 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP1P01033 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP1P01033 AC007613.1-201ENST00000572811 2597 ntBASIC16.88■□□□□ 0.29
TIMP1P01033 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP1P01033 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP1P01033 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP1P01033 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TIMP1P01033 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP1P01033 OR6D1P-202ENST00000641007 5290 ntBASIC16.88■□□□□ 0.29
TIMP1P01033 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP1P01033 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TIMP1P01033 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP1P01033 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP1P01033 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.88■□□□□ 0.29
TIMP1P01033 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
TIMP1P01033 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP1P01033 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP1P01033 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP1P01033 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP1P01033 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP1P01033 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.88■□□□□ 0.29
TIMP1P01033 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.88■□□□□ 0.29
TIMP1P01033 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP1P01033 EEF1DP6-201ENST00000449232 372 ntBASIC16.88■□□□□ 0.29
TIMP1P01033 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.88■□□□□ 0.29
TIMP1P01033 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.88■□□□□ 0.29
TIMP1P01033 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP1P01033 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.88■□□□□ 0.29
TIMP1P01033 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.88■□□□□ 0.29
TIMP1P01033 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP1P01033 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.88■□□□□ 0.29
TIMP1P01033 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.88■□□□□ 0.29
TIMP1P01033 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TIMP1P01033 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
TIMP1P01033 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.88■□□□□ 0.29
TIMP1P01033 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms