Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
BEST1O76090 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BEST1O76090 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
BEST1O76090 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.59■□□□□ 0.25
BEST1O76090 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
BEST1O76090 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
BEST1O76090 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
BEST1O76090 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
BEST1O76090 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
BEST1O76090 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BEST1O76090 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
BEST1O76090 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.59■□□□□ 0.25
BEST1O76090 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.25
BEST1O76090 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
BEST1O76090 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
BEST1O76090 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.58■□□□□ 0.25
BEST1O76090 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
BEST1O76090 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
BEST1O76090 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
BEST1O76090 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
BEST1O76090 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
BEST1O76090 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
BEST1O76090 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.58■□□□□ 0.24
BEST1O76090 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
BEST1O76090 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.58■□□□□ 0.24
BEST1O76090 MEP1AP4-201ENST00000423244 1087 ntBASIC16.58■□□□□ 0.24
BEST1O76090 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.58■□□□□ 0.24
BEST1O76090 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
BEST1O76090 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.58■□□□□ 0.24
BEST1O76090 AC123567.1-201ENST00000548294 1261 ntBASIC16.58■□□□□ 0.24
BEST1O76090 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.58■□□□□ 0.24
BEST1O76090 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.58■□□□□ 0.24
BEST1O76090 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
BEST1O76090 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BEST1O76090 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
BEST1O76090 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.58■□□□□ 0.24
BEST1O76090 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.58■□□□□ 0.24
BEST1O76090 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
BEST1O76090 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BEST1O76090 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.58■□□□□ 0.24
BEST1O76090 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
BEST1O76090 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BEST1O76090 AC092850.2-201ENST00000623821 2697 ntBASIC16.58■□□□□ 0.24
BEST1O76090 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
BEST1O76090 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
BEST1O76090 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BEST1O76090 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
BEST1O76090 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST1O76090 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST1O76090 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BEST1O76090 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST1O76090 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.57■□□□□ 0.24
BEST1O76090 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.57■□□□□ 0.24
BEST1O76090 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.57■□□□□ 0.24
BEST1O76090 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST1O76090 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.57■□□□□ 0.24
BEST1O76090 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST1O76090 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.57■□□□□ 0.24
BEST1O76090 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
BEST1O76090 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST1O76090 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BEST1O76090 AC138969.3-201ENST00000546612 1459 ntBASIC16.57■□□□□ 0.24
BEST1O76090 AC138932.2-201ENST00000548268 1459 ntBASIC16.57■□□□□ 0.24
BEST1O76090 AC126755.4-201ENST00000549796 1459 ntBASIC16.57■□□□□ 0.24
BEST1O76090 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BEST1O76090 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST1O76090 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST1O76090 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.57■□□□□ 0.24
BEST1O76090 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
BEST1O76090 AC087499.6-201ENST00000411576 835 ntBASIC16.57■□□□□ 0.24
BEST1O76090 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.57■□□□□ 0.24
BEST1O76090 RN7SL399P-201ENST00000471648 279 ntBASIC16.57■□□□□ 0.24
BEST1O76090 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.57■□□□□ 0.24
BEST1O76090 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.57■□□□□ 0.24
BEST1O76090 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.57■□□□□ 0.24
BEST1O76090 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.57■□□□□ 0.24
BEST1O76090 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.57■□□□□ 0.24
BEST1O76090 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BEST1O76090 CTBP2P3-201ENST00000585629 1255 ntBASIC16.57■□□□□ 0.24
BEST1O76090 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
BEST1O76090 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
BEST1O76090 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST1O76090 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST1O76090 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
BEST1O76090 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BEST1O76090 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST1O76090 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST1O76090 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST1O76090 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST1O76090 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST1O76090 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.56■□□□□ 0.24
BEST1O76090 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST1O76090 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.56■□□□□ 0.24
BEST1O76090 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.56■□□□□ 0.24
BEST1O76090 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
BEST1O76090 AL121723.1-201ENST00000445194 1519 ntBASIC16.56■□□□□ 0.24
BEST1O76090 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST1O76090 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST1O76090 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.56■□□□□ 0.24
BEST1O76090 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms