Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SNCGO76070 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC10.74□□□□□ -0.69
SNCGO76070 CRYGFP-201ENST00000418459 633 ntBASIC10.74□□□□□ -0.69
SNCGO76070 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC10.74□□□□□ -0.69
SNCGO76070 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SNCGO76070 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC10.74□□□□□ -0.69
SNCGO76070 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC10.74□□□□□ -0.69
SNCGO76070 RPS15-203ENST00000586096 570 ntTSL 2 BASIC10.74□□□□□ -0.69
SNCGO76070 AC024563.2-201ENST00000603282 481 ntBASIC10.74□□□□□ -0.69
SNCGO76070 GXYLT1P4-201ENST00000613576 1192 ntBASIC10.74□□□□□ -0.69
SNCGO76070 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC10.74□□□□□ -0.69
SNCGO76070 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC10.74□□□□□ -0.69
SNCGO76070 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SNCGO76070 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SNCGO76070 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC10.74□□□□□ -0.69
SNCGO76070 COCH-203ENST00000460581 2688 ntTSL 2 BASIC10.74□□□□□ -0.69
SNCGO76070 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SNCGO76070 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SNCGO76070 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC10.74□□□□□ -0.69
SNCGO76070 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
SNCGO76070 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
SNCGO76070 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SNCGO76070 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC10.74□□□□□ -0.69
SNCGO76070 FN1-212ENST00000446046 7952 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SNCGO76070 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
SNCGO76070 ESPL1-201ENST00000257934 6623 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
SNCGO76070 SRCAP-202ENST00000395059 9126 ntTSL 2 BASIC10.74□□□□□ -0.69
SNCGO76070 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC10.74□□□□□ -0.69
SNCGO76070 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC10.74□□□□□ -0.69
SNCGO76070 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
SNCGO76070 AC097637.2-201ENST00000624096 1997 ntBASIC10.74□□□□□ -0.69
SNCGO76070 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC10.74□□□□□ -0.69
SNCGO76070 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SNCGO76070 FRMD8P1-201ENST00000440433 1524 ntBASIC10.74□□□□□ -0.69
SNCGO76070 SNX29-205ENST00000566228 8171 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
SNCGO76070 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
SNCGO76070 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC10.73□□□□□ -0.69
SNCGO76070 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC10.73□□□□□ -0.69
SNCGO76070 SP3-201ENST00000310015 6359 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
SNCGO76070 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
SNCGO76070 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC10.73□□□□□ -0.69
SNCGO76070 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC10.73□□□□□ -0.69
SNCGO76070 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC10.73□□□□□ -0.69
SNCGO76070 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
SNCGO76070 COX5BP2-201ENST00000392354 334 ntBASIC10.73□□□□□ -0.69
SNCGO76070 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
SNCGO76070 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 AP003041.3-201ENST00000527151 707 ntBASIC10.73□□□□□ -0.69
SNCGO76070 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC10.73□□□□□ -0.69
SNCGO76070 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC10.73□□□□□ -0.69
SNCGO76070 AL353719.1-201ENST00000566847 864 ntBASIC10.73□□□□□ -0.69
SNCGO76070 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC10.73□□□□□ -0.69
SNCGO76070 MIR4674-201ENST00000582457 87 ntBASIC10.73□□□□□ -0.69
SNCGO76070 AF186192.3-201ENST00000583427 947 ntBASIC10.73□□□□□ -0.69
SNCGO76070 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC10.73□□□□□ -0.69
SNCGO76070 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC10.73□□□□□ -0.69
SNCGO76070 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
SNCGO76070 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC10.73□□□□□ -0.69
SNCGO76070 VPS72-207ENST00000640458 689 ntTSL 5 BASIC10.73□□□□□ -0.69
SNCGO76070 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC10.73□□□□□ -0.69
SNCGO76070 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC10.73□□□□□ -0.69
SNCGO76070 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC10.73□□□□□ -0.69
SNCGO76070 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
SNCGO76070 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 CACNA1G-204ENST00000359106 7648 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 CACNA1C-205ENST00000399591 6535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 CACNA1C-206ENST00000399595 6535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 CACNA1C-207ENST00000399597 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 CACNA1C-208ENST00000399601 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 CACNA1C-217ENST00000399641 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 CACNA1C-218ENST00000399644 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 AC080128.2-201ENST00000641520 11863 ntBASIC10.73□□□□□ -0.69
SNCGO76070 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 SSR4P1-203ENST00000599569 2260 ntBASIC10.73□□□□□ -0.69
SNCGO76070 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SNCGO76070 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms