Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
OPHN1O60890 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
OPHN1O60890 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
OPHN1O60890 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
OPHN1O60890 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
OPHN1O60890 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.67■□□□□ 0.26
OPHN1O60890 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
OPHN1O60890 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
OPHN1O60890 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
OPHN1O60890 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
OPHN1O60890 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
OPHN1O60890 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.67■□□□□ 0.26
OPHN1O60890 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
OPHN1O60890 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
OPHN1O60890 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
OPHN1O60890 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
OPHN1O60890 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
OPHN1O60890 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.67■□□□□ 0.26
OPHN1O60890 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
OPHN1O60890 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
OPHN1O60890 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
OPHN1O60890 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
OPHN1O60890 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
OPHN1O60890 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
OPHN1O60890 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
OPHN1O60890 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.67■□□□□ 0.26
OPHN1O60890 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.67■□□□□ 0.26
OPHN1O60890 AC069120.2-201ENST00000524091 540 ntBASIC16.67■□□□□ 0.26
OPHN1O60890 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
OPHN1O60890 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.67■□□□□ 0.26
OPHN1O60890 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.67■□□□□ 0.26
OPHN1O60890 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
OPHN1O60890 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
OPHN1O60890 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
OPHN1O60890 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.67■□□□□ 0.26
OPHN1O60890 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
OPHN1O60890 AC008677.1-201ENST00000519230 1561 ntBASIC16.67■□□□□ 0.26
OPHN1O60890 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
OPHN1O60890 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.67■□□□□ 0.26
OPHN1O60890 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
OPHN1O60890 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.67■□□□□ 0.26
OPHN1O60890 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
OPHN1O60890 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
OPHN1O60890 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
OPHN1O60890 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
OPHN1O60890 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
OPHN1O60890 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
OPHN1O60890 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
OPHN1O60890 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.66■□□□□ 0.26
OPHN1O60890 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
OPHN1O60890 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
OPHN1O60890 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
OPHN1O60890 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
OPHN1O60890 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
OPHN1O60890 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
OPHN1O60890 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
OPHN1O60890 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
OPHN1O60890 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
OPHN1O60890 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.66■□□□□ 0.26
OPHN1O60890 AC245100.5-201ENST00000452108 331 ntBASIC16.66■□□□□ 0.26
OPHN1O60890 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
OPHN1O60890 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.66■□□□□ 0.26
OPHN1O60890 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
OPHN1O60890 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.66■□□□□ 0.26
OPHN1O60890 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.66■□□□□ 0.26
OPHN1O60890 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
OPHN1O60890 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
OPHN1O60890 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
OPHN1O60890 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
OPHN1O60890 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.66■□□□□ 0.26
OPHN1O60890 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
OPHN1O60890 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.66■□□□□ 0.26
OPHN1O60890 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
OPHN1O60890 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
OPHN1O60890 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.66■□□□□ 0.26
OPHN1O60890 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
OPHN1O60890 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
OPHN1O60890 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
OPHN1O60890 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
OPHN1O60890 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.65■□□□□ 0.26
OPHN1O60890 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
OPHN1O60890 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
OPHN1O60890 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
OPHN1O60890 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
OPHN1O60890 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.65■□□□□ 0.26
OPHN1O60890 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.65■□□□□ 0.26
OPHN1O60890 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
OPHN1O60890 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.65■□□□□ 0.26
OPHN1O60890 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.65■□□□□ 0.26
OPHN1O60890 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
OPHN1O60890 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
OPHN1O60890 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
OPHN1O60890 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
OPHN1O60890 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.65■□□□□ 0.26
OPHN1O60890 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
OPHN1O60890 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.65■□□□□ 0.26
OPHN1O60890 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.65■□□□□ 0.26
OPHN1O60890 PRYP6-201ENST00000514804 343 ntBASIC16.65■□□□□ 0.26
OPHN1O60890 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.65■□□□□ 0.26
OPHN1O60890 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms