Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC3O60481 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.24□□□□□ -0.13
ZIC3O60481 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC3O60481 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC3O60481 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC3O60481 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
ZIC3O60481 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.24□□□□□ -0.13
ZIC3O60481 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.24□□□□□ -0.13
ZIC3O60481 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC3O60481 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC3O60481 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC3O60481 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC3O60481 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZIC3O60481 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC3O60481 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.23□□□□□ -0.13
ZIC3O60481 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.23□□□□□ -0.13
ZIC3O60481 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC3O60481 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC3O60481 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC3O60481 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC3O60481 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC3O60481 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC3O60481 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
ZIC3O60481 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
ZIC3O60481 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
ZIC3O60481 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ZIC3O60481 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
ZIC3O60481 AC008894.3-201ENST00000624324 3103 ntBASIC14.23□□□□□ -0.13
ZIC3O60481 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC3O60481 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC3O60481 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC3O60481 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC3O60481 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
ZIC3O60481 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.23□□□□□ -0.13
ZIC3O60481 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.23□□□□□ -0.13
ZIC3O60481 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.23□□□□□ -0.13
ZIC3O60481 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.23□□□□□ -0.13
ZIC3O60481 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
ZIC3O60481 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.23□□□□□ -0.13
ZIC3O60481 AL158212.4-201ENST00000624062 1286 ntBASIC14.23□□□□□ -0.13
ZIC3O60481 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
ZIC3O60481 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC3O60481 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ZIC3O60481 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.23□□□□□ -0.13
ZIC3O60481 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC3O60481 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC3O60481 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC3O60481 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.23□□□□□ -0.13
ZIC3O60481 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC3O60481 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC3O60481 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.23□□□□□ -0.13
ZIC3O60481 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC3O60481 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC3O60481 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZIC3O60481 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.23□□□□□ -0.13
ZIC3O60481 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
ZIC3O60481 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC3O60481 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC3O60481 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC3O60481 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
ZIC3O60481 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.22□□□□□ -0.13
ZIC3O60481 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.22□□□□□ -0.13
ZIC3O60481 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC3O60481 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ZIC3O60481 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.22□□□□□ -0.13
ZIC3O60481 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC3O60481 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
ZIC3O60481 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
ZIC3O60481 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC3O60481 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC3O60481 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
ZIC3O60481 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.22□□□□□ -0.13
ZIC3O60481 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC3O60481 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ZIC3O60481 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.22□□□□□ -0.13
ZIC3O60481 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.22□□□□□ -0.13
ZIC3O60481 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
ZIC3O60481 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.22□□□□□ -0.13
ZIC3O60481 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC3O60481 RN7SL399P-201ENST00000471648 279 ntBASIC14.22□□□□□ -0.13
ZIC3O60481 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ZIC3O60481 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.22□□□□□ -0.13
ZIC3O60481 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.22□□□□□ -0.13
ZIC3O60481 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.22□□□□□ -0.13
ZIC3O60481 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.22□□□□□ -0.13
ZIC3O60481 RRP7BP-205ENST00000566851 833 ntBASIC14.22□□□□□ -0.13
ZIC3O60481 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.22□□□□□ -0.13
ZIC3O60481 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.22□□□□□ -0.13
ZIC3O60481 MIR8072-201ENST00000614241 80 ntBASIC14.22□□□□□ -0.13
ZIC3O60481 CLK3P2-201ENST00000427566 1453 ntBASIC14.22□□□□□ -0.13
ZIC3O60481 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC3O60481 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
ZIC3O60481 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ZIC3O60481 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC3O60481 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC3O60481 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC3O60481 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC3O60481 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC3O60481 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC3O60481 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms