Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF3IP2O43734 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.15□□□□□ -0.14
TRAF3IP2O43734 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 AC092850.2-201ENST00000623821 2697 ntBASIC14.15□□□□□ -0.14
TRAF3IP2O43734 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 FO538757.1-201ENST00000623083 1397 ntBASIC14.15□□□□□ -0.14
TRAF3IP2O43734 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 RPL37AP1-201ENST00000412502 279 ntBASIC14.15□□□□□ -0.14
TRAF3IP2O43734 AC107890.1-201ENST00000422478 521 ntBASIC14.15□□□□□ -0.14
TRAF3IP2O43734 AC067863.1-201ENST00000494933 530 ntBASIC14.15□□□□□ -0.14
TRAF3IP2O43734 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 AC140878.1-201ENST00000565277 250 ntBASIC14.15□□□□□ -0.14
TRAF3IP2O43734 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 AL162727.3-201ENST00000635661 2787 ntBASIC14.15□□□□□ -0.14
TRAF3IP2O43734 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRAF3IP2O43734 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
TRAF3IP2O43734 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 AC092127.1-201ENST00000567093 3455 ntBASIC14.14□□□□□ -0.15
TRAF3IP2O43734 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 FAM86GP-201ENST00000448322 971 ntBASIC14.14□□□□□ -0.15
TRAF3IP2O43734 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 TEX28P1-201ENST00000613479 1221 ntBASIC14.14□□□□□ -0.15
TRAF3IP2O43734 AL138828.2-201ENST00000615812 383 ntBASIC14.14□□□□□ -0.15
TRAF3IP2O43734 TEX28P2-201ENST00000617764 1221 ntBASIC14.14□□□□□ -0.15
TRAF3IP2O43734 AC073592.8-201ENST00000624126 511 ntBASIC14.14□□□□□ -0.15
TRAF3IP2O43734 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms