Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CASQ2O14958 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASQ2O14958 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASQ2O14958 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASQ2O14958 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.14■□□□□ 0.01
CASQ2O14958 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CASQ2O14958 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
CASQ2O14958 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.14■□□□□ 0.01
CASQ2O14958 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASQ2O14958 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CASQ2O14958 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
CASQ2O14958 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CASQ2O14958 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CASQ2O14958 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.14■□□□□ 0.01
CASQ2O14958 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASQ2O14958 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.14■□□□□ 0.01
CASQ2O14958 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CASQ2O14958 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASQ2O14958 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CASQ2O14958 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASQ2O14958 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASQ2O14958 ARMC10P1-201ENST00000313754 855 ntBASIC15.14■□□□□ 0.01
CASQ2O14958 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CASQ2O14958 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CASQ2O14958 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.14■□□□□ 0.01
CASQ2O14958 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.14■□□□□ 0.01
CASQ2O14958 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.14■□□□□ 0.01
CASQ2O14958 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.14■□□□□ 0.01
CASQ2O14958 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CASQ2O14958 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.14■□□□□ 0.01
CASQ2O14958 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CASQ2O14958 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASQ2O14958 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASQ2O14958 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CASQ2O14958 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASQ2O14958 NCF1C-201ENST00000438382 1427 ntBASIC15.14■□□□□ 0.01
CASQ2O14958 AC010327.5-201ENST00000586923 3061 ntBASIC15.14■□□□□ 0.01
CASQ2O14958 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASQ2O14958 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.14■□□□□ 0.01
CASQ2O14958 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CASQ2O14958 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
CASQ2O14958 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASQ2O14958 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CASQ2O14958 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASQ2O14958 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASQ2O14958 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.14■□□□□ 0.01
CASQ2O14958 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.14■□□□□ 0.01
CASQ2O14958 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASQ2O14958 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CASQ2O14958 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASQ2O14958 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASQ2O14958 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CASQ2O14958 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CASQ2O14958 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CASQ2O14958 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CASQ2O14958 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CASQ2O14958 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CASQ2O14958 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CASQ2O14958 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CASQ2O14958 AL359183.1-201ENST00000623796 2132 ntBASIC15.13■□□□□ 0.01
CASQ2O14958 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.13■□□□□ 0.01
CASQ2O14958 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CASQ2O14958 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CASQ2O14958 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CASQ2O14958 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CASQ2O14958 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CASQ2O14958 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CASQ2O14958 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CASQ2O14958 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CASQ2O14958 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.13■□□□□ 0.01
CASQ2O14958 COX11P1-201ENST00000489116 835 ntBASIC15.13■□□□□ 0.01
CASQ2O14958 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
CASQ2O14958 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
CASQ2O14958 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.13■□□□□ 0.01
CASQ2O14958 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.13■□□□□ 0.01
CASQ2O14958 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.13■□□□□ 0.01
CASQ2O14958 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.13■□□□□ 0.01
CASQ2O14958 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.13■□□□□ 0.01
CASQ2O14958 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.13■□□□□ 0.01
CASQ2O14958 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.13■□□□□ 0.01
CASQ2O14958 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
CASQ2O14958 AC073592.4-201ENST00000623827 446 ntBASIC15.13■□□□□ 0.01
CASQ2O14958 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CASQ2O14958 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.13■□□□□ 0.01
CASQ2O14958 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.13■□□□□ 0.01
CASQ2O14958 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CASQ2O14958 HSPA7-201ENST00000445535 1927 ntBASIC15.13■□□□□ 0.01
CASQ2O14958 ZBED1P1-201ENST00000502364 1930 ntBASIC15.13■□□□□ 0.01
CASQ2O14958 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.13■□□□□ 0.01
CASQ2O14958 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.13■□□□□ 0.01
CASQ2O14958 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CASQ2O14958 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CASQ2O14958 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CASQ2O14958 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CASQ2O14958 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CASQ2O14958 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CASQ2O14958 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CASQ2O14958 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CASQ2O14958 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CASQ2O14958 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms