Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHD2O14647 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHD2O14647 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHD2O14647 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21.49■■□□□ 1.03
CHD2O14647 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHD2O14647 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC21.49■■□□□ 1.03
CHD2O14647 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHD2O14647 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
CHD2O14647 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CHD2O14647 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHD2O14647 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHD2O14647 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHD2O14647 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC21.48■■□□□ 1.03
CHD2O14647 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC21.48■■□□□ 1.03
CHD2O14647 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CHD2O14647 AC135983.4-201ENST00000564116 1262 ntBASIC21.48■■□□□ 1.03
CHD2O14647 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
CHD2O14647 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHD2O14647 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CHD2O14647 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC21.48■■□□□ 1.03
CHD2O14647 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHD2O14647 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHD2O14647 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC21.48■■□□□ 1.03
CHD2O14647 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC21.48■■□□□ 1.03
CHD2O14647 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC21.48■■□□□ 1.03
CHD2O14647 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
CHD2O14647 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHD2O14647 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC21.48■■□□□ 1.03
CHD2O14647 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHD2O14647 RN7SL8P-201ENST00000461771 266 ntBASIC21.48■■□□□ 1.03
CHD2O14647 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC21.48■■□□□ 1.03
CHD2O14647 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC21.48■■□□□ 1.03
CHD2O14647 MIR4683-201ENST00000579659 81 ntBASIC21.48■■□□□ 1.03
CHD2O14647 AC006453.1-201ENST00000636037 1257 ntBASIC21.48■■□□□ 1.03
CHD2O14647 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHD2O14647 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHD2O14647 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC21.47■■□□□ 1.03
CHD2O14647 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHD2O14647 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC21.47■■□□□ 1.03
CHD2O14647 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHD2O14647 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHD2O14647 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC21.47■■□□□ 1.03
CHD2O14647 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC21.47■■□□□ 1.03
CHD2O14647 CMC1-204ENST00000423894 549 ntTSL 2 BASIC21.47■■□□□ 1.03
CHD2O14647 ISCA2P1-201ENST00000425548 448 ntBASIC21.47■■□□□ 1.03
CHD2O14647 AC006335.1-201ENST00000445200 547 ntBASIC21.47■■□□□ 1.03
CHD2O14647 AC073150.1-201ENST00000450406 1084 ntBASIC21.47■■□□□ 1.03
CHD2O14647 HLA-J-204ENST00000495278 958 ntBASIC21.47■■□□□ 1.03
CHD2O14647 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC21.47■■□□□ 1.03
CHD2O14647 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC21.47■■□□□ 1.03
CHD2O14647 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC21.47■■□□□ 1.03
CHD2O14647 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC21.47■■□□□ 1.03
CHD2O14647 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHD2O14647 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC21.47■■□□□ 1.03
CHD2O14647 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC21.47■■□□□ 1.03
CHD2O14647 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CHD2O14647 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHD2O14647 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHD2O14647 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHD2O14647 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHD2O14647 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC21.46■■□□□ 1.03
CHD2O14647 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CHD2O14647 AL157791.1-201ENST00000553667 1699 ntBASIC21.46■■□□□ 1.03
CHD2O14647 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHD2O14647 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHD2O14647 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CHD2O14647 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CHD2O14647 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC21.46■■□□□ 1.03
CHD2O14647 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC21.46■■□□□ 1.03
CHD2O14647 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
CHD2O14647 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHD2O14647 SAMD11P1-201ENST00000571429 661 ntBASIC21.46■■□□□ 1.03
CHD2O14647 MIR4754-201ENST00000582477 89 ntBASIC21.46■■□□□ 1.03
CHD2O14647 AC132192.2-201ENST00000596206 1147 ntBASIC21.46■■□□□ 1.03
CHD2O14647 AC012044.1-201ENST00000603431 297 ntBASIC21.46■■□□□ 1.03
CHD2O14647 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.46■■□□□ 1.03
CHD2O14647 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC21.46■■□□□ 1.03
CHD2O14647 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
CHD2O14647 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CHD2O14647 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CHD2O14647 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC21.46■■□□□ 1.03
CHD2O14647 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHD2O14647 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHD2O14647 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CHD2O14647 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CHD2O14647 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.46■■□□□ 1.03
CHD2O14647 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CHD2O14647 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
CHD2O14647 RTN3P1-201ENST00000536295 711 ntBASIC21.45■■□□□ 1.03
CHD2O14647 AC242376.1-201ENST00000559033 726 ntBASIC21.45■■□□□ 1.03
CHD2O14647 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC21.45■■□□□ 1.03
CHD2O14647 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
CHD2O14647 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC21.45■■□□□ 1.03
CHD2O14647 WT1-AS_6.1-201ENST00000614919 121 ntBASIC21.45■■□□□ 1.03
CHD2O14647 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
CHD2O14647 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC21.45■■□□□ 1.03
CHD2O14647 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.03
CHD2O14647 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.45■■□□□ 1.03
CHD2O14647 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CHD2O14647 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms