Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX1O00570 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.64■□□□□ 0.25
SOX1O00570 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX1O00570 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SOX1O00570 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SOX1O00570 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SOX1O00570 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX1O00570 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.64■□□□□ 0.25
SOX1O00570 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX1O00570 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.64■□□□□ 0.25
SOX1O00570 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.64■□□□□ 0.25
SOX1O00570 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX1O00570 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SOX1O00570 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SOX1O00570 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX1O00570 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SOX1O00570 RNU1-114P-201ENST00000365297 166 ntBASIC16.64■□□□□ 0.25
SOX1O00570 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.64■□□□□ 0.25
SOX1O00570 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SOX1O00570 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX1O00570 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX1O00570 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC16.64■□□□□ 0.25
SOX1O00570 AC026410.1-201ENST00000507366 1101 ntBASIC16.64■□□□□ 0.25
SOX1O00570 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.64■□□□□ 0.25
SOX1O00570 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.64■□□□□ 0.25
SOX1O00570 AC243562.2-201ENST00000561247 970 ntBASIC16.64■□□□□ 0.25
SOX1O00570 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.64■□□□□ 0.25
SOX1O00570 FTLP5-201ENST00000586853 534 ntBASIC16.64■□□□□ 0.25
SOX1O00570 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.64■□□□□ 0.25
SOX1O00570 AC073413.1-201ENST00000603927 732 ntBASIC16.64■□□□□ 0.25
SOX1O00570 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
SOX1O00570 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SOX1O00570 KRT8P4-201ENST00000509735 1454 ntBASIC16.64■□□□□ 0.25
SOX1O00570 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
SOX1O00570 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.64■□□□□ 0.25
SOX1O00570 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SOX1O00570 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX1O00570 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX1O00570 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX1O00570 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX1O00570 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SOX1O00570 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX1O00570 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX1O00570 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
SOX1O00570 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.64■□□□□ 0.25
SOX1O00570 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.64■□□□□ 0.25
SOX1O00570 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.64■□□□□ 0.25
SOX1O00570 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SOX1O00570 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX1O00570 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
SOX1O00570 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
SOX1O00570 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.63■□□□□ 0.25
SOX1O00570 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.63■□□□□ 0.25
SOX1O00570 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.63■□□□□ 0.25
SOX1O00570 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX1O00570 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.63■□□□□ 0.25
SOX1O00570 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SOX1O00570 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX1O00570 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX1O00570 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SOX1O00570 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC16.63■□□□□ 0.25
SOX1O00570 KLF2P2-201ENST00000416807 1039 ntBASIC16.63■□□□□ 0.25
SOX1O00570 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.63■□□□□ 0.25
SOX1O00570 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SOX1O00570 POU5F1P6-201ENST00000466990 990 ntBASIC16.63■□□□□ 0.25
SOX1O00570 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.63■□□□□ 0.25
SOX1O00570 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
SOX1O00570 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC16.63■□□□□ 0.25
SOX1O00570 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.63■□□□□ 0.25
SOX1O00570 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
SOX1O00570 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.63■□□□□ 0.25
SOX1O00570 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SOX1O00570 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX1O00570 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SOX1O00570 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SOX1O00570 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SOX1O00570 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.63■□□□□ 0.25
SOX1O00570 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SOX1O00570 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.62■□□□□ 0.25
SOX1O00570 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX1O00570 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX1O00570 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX1O00570 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.62■□□□□ 0.25
SOX1O00570 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX1O00570 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX1O00570 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SOX1O00570 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX1O00570 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX1O00570 AP000356.3-201ENST00000382243 753 ntBASIC16.62■□□□□ 0.25
SOX1O00570 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC16.62■□□□□ 0.25
SOX1O00570 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC16.62■□□□□ 0.25
SOX1O00570 GAPDHP40-201ENST00000505218 1006 ntBASIC16.62■□□□□ 0.25
SOX1O00570 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SOX1O00570 RN7SL163P-201ENST00000583100 276 ntBASIC16.62■□□□□ 0.25
SOX1O00570 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.62■□□□□ 0.25
SOX1O00570 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.62■□□□□ 0.25
SOX1O00570 AC007881.3-201ENST00000608897 607 ntBASIC16.62■□□□□ 0.25
SOX1O00570 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
SOX1O00570 BX539320.1-201ENST00000623759 877 ntBASIC16.62■□□□□ 0.25
SOX1O00570 AC233280.19-201ENST00000633223 136 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms