Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 FXN-203ENST00000396366 922 ntTSL 2 BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 PTCHD3P3-201ENST00000403073 906 ntBASIC11.68□□□□□ -0.54
SMKR1H3BMG3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 IGHV3-47-201ENST00000425060 335 ntBASIC11.68□□□□□ -0.54
SMKR1H3BMG3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 LINC00265-3P-201ENST00000447588 903 ntBASIC11.68□□□□□ -0.54
SMKR1H3BMG3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
SMKR1H3BMG3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 AC087386.2-201ENST00000623212 4637 ntBASIC11.67□□□□□ -0.54
SMKR1H3BMG3 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 AC104076.2-201ENST00000448912 469 ntBASIC11.67□□□□□ -0.54
SMKR1H3BMG3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 PRYP5-201ENST00000451909 266 ntBASIC11.67□□□□□ -0.54
SMKR1H3BMG3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms