Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 GK-202ENST00000378941 458 ntTSL 3 BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 MIR648-201ENST00000385046 94 ntBASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 NME2P1-201ENST00000426182 414 ntBASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 SDHAP3-202ENST00000515467 728 ntBASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 API5-211ENST00000534695 560 ntTSL 5 BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 AC140912.1-201ENST00000577171 1054 ntBASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 MIR4321-201ENST00000592276 80 ntBASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 AL109936.8-201ENST00000641772 604 ntBASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPIPA2E9PIF3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 DFFBP1-201ENST00000433250 979 ntBASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 KRT17P7-201ENST00000451704 1104 ntBASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 AC245100.5-201ENST00000452108 331 ntBASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 SPDYE18-201ENST00000510091 1050 ntBASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 CR383656.12-201ENST00000549567 513 ntBASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPIPA2E9PIF3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.48□□□□□ -0.09
NPIPA2E9PIF3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms