Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 AC008735.5-201ENST00000623544 497 ntBASIC17.32■□□□□ 0.36
CCDC66A2RUB6 PGM5P2-202ENST00000637225 1043 ntBASIC17.32■□□□□ 0.36
CCDC66A2RUB6 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC66A2RUB6 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 AC012569.1-201ENST00000591191 1524 ntBASIC17.31■□□□□ 0.36
CCDC66A2RUB6 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 AL450487.1-201ENST00000426799 995 ntBASIC17.31■□□□□ 0.36
CCDC66A2RUB6 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC66A2RUB6 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CCDC66A2RUB6 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC66A2RUB6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC66A2RUB6 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC66A2RUB6 CDC14C-201ENST00000428251 1719 ntBASIC17.3■□□□□ 0.36
CCDC66A2RUB6 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC66A2RUB6 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC66A2RUB6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC66A2RUB6 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC66A2RUB6 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CCDC66A2RUB6 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC66A2RUB6 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC66A2RUB6 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC66A2RUB6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CCDC66A2RUB6 MIR648-201ENST00000385046 94 ntBASIC17.3■□□□□ 0.36
CCDC66A2RUB6 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC66A2RUB6 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.3■□□□□ 0.36
CCDC66A2RUB6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CCDC66A2RUB6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC66A2RUB6 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms