Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHGA9Q9Y5G4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 TSPY26P-202ENST00000565928 3884 ntBASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 TMEM261P1-201ENST00000604899 340 ntBASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 AC074044.1-201ENST00000609673 707 ntBASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 LINC02228-204ENST00000642115 2962 ntBASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGA9Q9Y5G4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 FO393414.2-201ENST00000405153 598 ntBASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 AP005482.1-201ENST00000563722 1273 ntBASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 CTBP2P3-201ENST00000585629 1255 ntBASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
PCDHGA9Q9Y5G4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms