Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
SSX2IPQ9Y2D8 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 AL596257.1-201ENST00000641463 2694 ntBASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 WASH4P-201ENST00000564273 1246 ntBASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 AC025048.3-201ENST00000590609 569 ntBASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 TMEM261P1-201ENST00000604899 340 ntBASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 AC005702.4-201ENST00000618393 416 ntBASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 GGT3P-204ENST00000453783 1664 ntBASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SSX2IPQ9Y2D8 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 RARRES2P5-201ENST00000564013 466 ntBASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SSX2IPQ9Y2D8 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms