Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.41■□□□□ 0.06
CPNE7Q9UBL6 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.41■□□□□ 0.06
CPNE7Q9UBL6 AC093726.1-201ENST00000608064 963 ntBASIC15.41■□□□□ 0.06
CPNE7Q9UBL6 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.41■□□□□ 0.06
CPNE7Q9UBL6 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.41■□□□□ 0.06
CPNE7Q9UBL6 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CPNE7Q9UBL6 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE7Q9UBL6 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE7Q9UBL6 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE7Q9UBL6 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE7Q9UBL6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE7Q9UBL6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.41■□□□□ 0.06
CPNE7Q9UBL6 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE7Q9UBL6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE7Q9UBL6 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CPNE7Q9UBL6 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.41■□□□□ 0.06
CPNE7Q9UBL6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CPNE7Q9UBL6 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.41■□□□□ 0.06
CPNE7Q9UBL6 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 AP006294.1-201ENST00000415407 339 ntBASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 WASH4P-201ENST00000564273 1246 ntBASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 AC018892.3-201ENST00000623986 2499 ntBASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE7Q9UBL6 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
CPNE7Q9UBL6 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE7Q9UBL6 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE7Q9UBL6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CPNE7Q9UBL6 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE7Q9UBL6 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CPNE7Q9UBL6 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE7Q9UBL6 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE7Q9UBL6 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.39■□□□□ 0.05
CPNE7Q9UBL6 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE7Q9UBL6 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.39■□□□□ 0.05
CPNE7Q9UBL6 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE7Q9UBL6 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE7Q9UBL6 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE7Q9UBL6 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE7Q9UBL6 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE7Q9UBL6 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE7Q9UBL6 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE7Q9UBL6 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CPNE7Q9UBL6 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.39■□□□□ 0.05
CPNE7Q9UBL6 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE7Q9UBL6 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.39■□□□□ 0.05
CPNE7Q9UBL6 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.39■□□□□ 0.05
CPNE7Q9UBL6 AC097359.3-201ENST00000603982 1210 ntBASIC15.39■□□□□ 0.05
CPNE7Q9UBL6 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE7Q9UBL6 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CPNE7Q9UBL6 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE7Q9UBL6 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE7Q9UBL6 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE7Q9UBL6 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms