Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 AC067930.6-201ENST00000623257 4947 ntBASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 AC004987.2-201ENST00000395959 1148 ntBASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 AC125807.1-201ENST00000483097 614 ntBASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 AC243562.2-201ENST00000561247 970 ntBASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PPARGC1AQ9UBK2 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 AC107890.1-201ENST00000422478 521 ntBASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 RFPL4AP1-201ENST00000530883 850 ntBASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 AL136982.4-201ENST00000437689 1740 ntBASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PPARGC1AQ9UBK2 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 SPDYE17-201ENST00000412399 783 ntBASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms