Protein–RNA interactions for Protein: Q9P2E5

CHPF2, Chondroitin sulfate glucuronyltransferase, humanhuman

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2Q9P2E5 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC20.04■□□□□ 0.8
CHPF2Q9P2E5 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC20.04■□□□□ 0.8
CHPF2Q9P2E5 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC20.04■□□□□ 0.8
CHPF2Q9P2E5 CU634019.7-201ENST00000624153 1185 ntBASIC20.04■□□□□ 0.8
CHPF2Q9P2E5 FP236241.2-201ENST00000624906 1185 ntBASIC20.04■□□□□ 0.8
CHPF2Q9P2E5 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHPF2Q9P2E5 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHPF2Q9P2E5 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHPF2Q9P2E5 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHPF2Q9P2E5 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHPF2Q9P2E5 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHPF2Q9P2E5 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC20.04■□□□□ 0.8
CHPF2Q9P2E5 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC20.04■□□□□ 0.8
CHPF2Q9P2E5 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHPF2Q9P2E5 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CHPF2Q9P2E5 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHPF2Q9P2E5 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHPF2Q9P2E5 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CHPF2Q9P2E5 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC20.04■□□□□ 0.8
CHPF2Q9P2E5 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC20.04■□□□□ 0.8
CHPF2Q9P2E5 TK1-203ENST00000588734 1681 ntTSL 2 BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 KRT8P22-201ENST00000562317 1415 ntBASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 BANP-204ENST00000393208 2283 ntTSL 2 BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 KRT17P8-201ENST00000540749 863 ntBASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 AC120045.2-201ENST00000567334 178 ntBASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHPF2Q9P2E5 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHPF2Q9P2E5 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHPF2Q9P2E5 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CHPF2Q9P2E5 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHPF2Q9P2E5 AL391005.1-201ENST00000623953 2435 ntBASIC20.02■□□□□ 0.8
CHPF2Q9P2E5 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CHPF2Q9P2E5 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHPF2Q9P2E5 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
CHPF2Q9P2E5 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CHPF2Q9P2E5 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CHPF2Q9P2E5 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHPF2Q9P2E5 AC134915.1-201ENST00000426461 574 ntBASIC20.02■□□□□ 0.8
CHPF2Q9P2E5 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHPF2Q9P2E5 ATP5G2P4-201ENST00000442175 420 ntBASIC20.02■□□□□ 0.8
CHPF2Q9P2E5 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHPF2Q9P2E5 ACA64.2-201ENST00000459014 129 ntBASIC20.02■□□□□ 0.8
CHPF2Q9P2E5 USP32P1-208ENST00000506594 1164 ntBASIC20.02■□□□□ 0.8
CHPF2Q9P2E5 IGHV3-71-201ENST00000523324 359 ntBASIC20.02■□□□□ 0.8
CHPF2Q9P2E5 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHPF2Q9P2E5 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC20.02■□□□□ 0.8
CHPF2Q9P2E5 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC20.02■□□□□ 0.8
CHPF2Q9P2E5 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC20.02■□□□□ 0.8
CHPF2Q9P2E5 APOC4-201ENST00000591600 348 ntTSL 3 BASIC20.02■□□□□ 0.8
CHPF2Q9P2E5 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC20.02■□□□□ 0.8
CHPF2Q9P2E5 AL008721.1-201ENST00000609964 604 ntBASIC20.02■□□□□ 0.8
CHPF2Q9P2E5 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC20.02■□□□□ 0.8
CHPF2Q9P2E5 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CHPF2Q9P2E5 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CHPF2Q9P2E5 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC20.02■□□□□ 0.8
CHPF2Q9P2E5 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
CHPF2Q9P2E5 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHPF2Q9P2E5 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHPF2Q9P2E5 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
CHPF2Q9P2E5 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
CHPF2Q9P2E5 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC20.02■□□□□ 0.79
CHPF2Q9P2E5 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC20.02■□□□□ 0.79
CHPF2Q9P2E5 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms