Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CD248Q9HCU0 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CD248Q9HCU0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD248Q9HCU0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CD248Q9HCU0 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.8■□□□□ 0.28
CD248Q9HCU0 MRPS18AP1-201ENST00000414458 589 ntBASIC16.8■□□□□ 0.28
CD248Q9HCU0 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.8■□□□□ 0.28
CD248Q9HCU0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.8■□□□□ 0.28
CD248Q9HCU0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.8■□□□□ 0.28
CD248Q9HCU0 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CD248Q9HCU0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.8■□□□□ 0.28
CD248Q9HCU0 AC004890.2-204ENST00000481968 304 ntBASIC16.8■□□□□ 0.28
CD248Q9HCU0 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.8■□□□□ 0.28
CD248Q9HCU0 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.8■□□□□ 0.28
CD248Q9HCU0 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.8■□□□□ 0.28
CD248Q9HCU0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.8■□□□□ 0.28
CD248Q9HCU0 AC190387.1-201ENST00000551683 408 ntBASIC16.8■□□□□ 0.28
CD248Q9HCU0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.8■□□□□ 0.28
CD248Q9HCU0 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.8■□□□□ 0.28
CD248Q9HCU0 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.8■□□□□ 0.28
CD248Q9HCU0 AC239800.4-201ENST00000603712 296 ntBASIC16.8■□□□□ 0.28
CD248Q9HCU0 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD248Q9HCU0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CD248Q9HCU0 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD248Q9HCU0 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CD248Q9HCU0 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CD248Q9HCU0 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD248Q9HCU0 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD248Q9HCU0 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.8■□□□□ 0.28
CD248Q9HCU0 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.8■□□□□ 0.28
CD248Q9HCU0 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.8■□□□□ 0.28
CD248Q9HCU0 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD248Q9HCU0 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CD248Q9HCU0 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.8■□□□□ 0.28
CD248Q9HCU0 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD248Q9HCU0 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD248Q9HCU0 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD248Q9HCU0 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CD248Q9HCU0 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CD248Q9HCU0 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD248Q9HCU0 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CD248Q9HCU0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.79■□□□□ 0.28
CD248Q9HCU0 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CD248Q9HCU0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CD248Q9HCU0 LINC02012-201ENST00000608206 1725 ntBASIC16.79■□□□□ 0.28
CD248Q9HCU0 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CD248Q9HCU0 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.79■□□□□ 0.28
CD248Q9HCU0 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CD248Q9HCU0 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.79■□□□□ 0.28
CD248Q9HCU0 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CD248Q9HCU0 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD248Q9HCU0 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.79■□□□□ 0.28
CD248Q9HCU0 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD248Q9HCU0 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD248Q9HCU0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.79■□□□□ 0.28
CD248Q9HCU0 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD248Q9HCU0 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CD248Q9HCU0 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CD248Q9HCU0 TSSK5P-201ENST00000423978 907 ntBASIC16.79■□□□□ 0.28
CD248Q9HCU0 TERF1P3-201ENST00000505638 1227 ntBASIC16.79■□□□□ 0.28
CD248Q9HCU0 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.79■□□□□ 0.28
CD248Q9HCU0 AC105233.2-201ENST00000523697 349 ntBASIC16.79■□□□□ 0.28
CD248Q9HCU0 AF228730.5-201ENST00000530288 346 ntBASIC16.79■□□□□ 0.28
CD248Q9HCU0 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.79■□□□□ 0.28
CD248Q9HCU0 RARRES2P9-201ENST00000565168 469 ntBASIC16.79■□□□□ 0.28
CD248Q9HCU0 AC008761.3-201ENST00000624803 892 ntBASIC16.79■□□□□ 0.28
CD248Q9HCU0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CD248Q9HCU0 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD248Q9HCU0 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CD248Q9HCU0 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD248Q9HCU0 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD248Q9HCU0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CD248Q9HCU0 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CD248Q9HCU0 PPP1R26P4-201ENST00000619065 3527 ntBASIC16.79■□□□□ 0.28
CD248Q9HCU0 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CD248Q9HCU0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD248Q9HCU0 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CD248Q9HCU0 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD248Q9HCU0 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CD248Q9HCU0 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD248Q9HCU0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.78■□□□□ 0.28
CD248Q9HCU0 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CD248Q9HCU0 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CD248Q9HCU0 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD248Q9HCU0 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.78■□□□□ 0.28
CD248Q9HCU0 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CD248Q9HCU0 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CD248Q9HCU0 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CD248Q9HCU0 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD248Q9HCU0 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD248Q9HCU0 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.78■□□□□ 0.28
CD248Q9HCU0 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CD248Q9HCU0 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.78■□□□□ 0.28
CD248Q9HCU0 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.78■□□□□ 0.28
CD248Q9HCU0 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD248Q9HCU0 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
CD248Q9HCU0 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.78■□□□□ 0.28
CD248Q9HCU0 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.78■□□□□ 0.28
CD248Q9HCU0 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.78■□□□□ 0.28
CD248Q9HCU0 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms