Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.33■□□□□ 0.05
LRTM1Q9HBL6 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.33■□□□□ 0.05
LRTM1Q9HBL6 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 ADH5P3-201ENST00000433842 1137 ntBASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 SPDYE11-202ENST00000450699 704 ntBASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 AC243562.1-201ENST00000560672 389 ntBASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 SPDYE9P-201ENST00000570642 692 ntBASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 MIR4313-201ENST00000580760 101 ntBASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 SPDYE10P-202ENST00000612005 668 ntBASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 SPDYE8P-202ENST00000612377 668 ntBASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRTM1Q9HBL6 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 AL136982.4-201ENST00000437689 1740 ntBASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 MIR346-201ENST00000362234 95 ntBASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 HLA-H-201ENST00000383620 1096 ntBASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 SPCS2P4-201ENST00000436160 681 ntBASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 AP000842.3-202ENST00000569238 1080 ntBASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 AC026120.1-201ENST00000611536 926 ntBASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRTM1Q9HBL6 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms