Protein–RNA interactions for Protein: Q9H0K1

SIK2, Serine/threonine-protein kinase SIK2, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIK2Q9H0K1 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SIK2Q9H0K1 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SIK2Q9H0K1 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 AL365203.3-201ENST00000609742 2057 ntBASIC16.51■□□□□ 0.23
SIK2Q9H0K1 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 HMGN1P19-201ENST00000436976 333 ntBASIC16.51■□□□□ 0.23
SIK2Q9H0K1 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 AL450472.2-201ENST00000603663 1156 ntBASIC16.51■□□□□ 0.23
SIK2Q9H0K1 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SIK2Q9H0K1 NORAD-201ENST00000565493 5339 ntBASIC16.5■□□□□ 0.23
SIK2Q9H0K1 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIK2Q9H0K1 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIK2Q9H0K1 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.5■□□□□ 0.23
SIK2Q9H0K1 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.5■□□□□ 0.23
SIK2Q9H0K1 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIK2Q9H0K1 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SIK2Q9H0K1 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIK2Q9H0K1 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.5■□□□□ 0.23
SIK2Q9H0K1 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
SIK2Q9H0K1 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SIK2Q9H0K1 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIK2Q9H0K1 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.5■□□□□ 0.23
SIK2Q9H0K1 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SIK2Q9H0K1 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.5■□□□□ 0.23
SIK2Q9H0K1 EEF1DP4-201ENST00000446006 880 ntBASIC16.5■□□□□ 0.23
SIK2Q9H0K1 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.5■□□□□ 0.23
SIK2Q9H0K1 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.5■□□□□ 0.23
SIK2Q9H0K1 AC004890.2-204ENST00000481968 304 ntBASIC16.5■□□□□ 0.23
SIK2Q9H0K1 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.5■□□□□ 0.23
SIK2Q9H0K1 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SIK2Q9H0K1 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.5■□□□□ 0.23
SIK2Q9H0K1 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.5■□□□□ 0.23
SIK2Q9H0K1 AC010336.2-201ENST00000564226 506 ntBASIC16.5■□□□□ 0.23
SIK2Q9H0K1 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.5■□□□□ 0.23
SIK2Q9H0K1 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.5■□□□□ 0.23
SIK2Q9H0K1 AC011467.4-201ENST00000594891 528 ntBASIC16.5■□□□□ 0.23
SIK2Q9H0K1 AL844908.2-201ENST00000609461 460 ntBASIC16.5■□□□□ 0.23
SIK2Q9H0K1 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.5■□□□□ 0.23
SIK2Q9H0K1 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SIK2Q9H0K1 AC132872.4-202ENST00000622924 2756 ntBASIC16.5■□□□□ 0.23
SIK2Q9H0K1 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SIK2Q9H0K1 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIK2Q9H0K1 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIK2Q9H0K1 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.5■□□□□ 0.23
SIK2Q9H0K1 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIK2Q9H0K1 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIK2Q9H0K1 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIK2Q9H0K1 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIK2Q9H0K1 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.49■□□□□ 0.23
SIK2Q9H0K1 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIK2Q9H0K1 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.49■□□□□ 0.23
SIK2Q9H0K1 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.49■□□□□ 0.23
SIK2Q9H0K1 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIK2Q9H0K1 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
SIK2Q9H0K1 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.49■□□□□ 0.23
SIK2Q9H0K1 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.49■□□□□ 0.23
SIK2Q9H0K1 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SIK2Q9H0K1 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIK2Q9H0K1 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIK2Q9H0K1 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms