Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 ELP2-228ENST00000545632 569 ntTSL 415.33■□□□□ 0.043e-9■□□□□ 9.1
XRN2Q9H0D6 ELP2-211ENST00000540135 575 ntTSL 314.84□□□□□ -0.033e-9■□□□□ 9.1
XRN2Q9H0D6 ELP2-216ENST00000541190 583 ntTSL 214.71□□□□□ -0.053e-9■□□□□ 9.1
XRN2Q9H0D6 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC14.15□□□□□ -0.143e-9■□□□□ 9.1
XRN2Q9H0D6 ELP2-220ENST00000542430 649 ntTSL 513.64□□□□□ -0.233e-9■□□□□ 9.1
XRN2Q9H0D6 ELP2-207ENST00000535488 692 ntTSL 212.97□□□□□ -0.333e-9■□□□□ 9.1
XRN2Q9H0D6 ELP2-204ENST00000423854 2385 ntTSL 1 (best) BASIC12.76□□□□□ -0.373e-9■□□□□ 9.1
XRN2Q9H0D6 ELP2-215ENST00000540799 381 ntTSL 312.71□□□□□ -0.373e-9■□□□□ 9.1
XRN2Q9H0D6 ELP2-201ENST00000350494 2487 ntTSL 2 BASIC11.64□□□□□ -0.553e-9■□□□□ 9.1
XRN2Q9H0D6 ELP2-202ENST00000351393 2453 ntTSL 2 BASIC11.44□□□□□ -0.583e-9■□□□□ 9.1
XRN2Q9H0D6 ELP2-210ENST00000539560 2542 ntTSL 1 (best)9.91□□□□□ -0.823e-9■□□□□ 9.1
XRN2Q9H0D6 ELP2-222ENST00000543127 535 ntTSL 49.64□□□□□ -0.873e-9■□□□□ 9.1
XRN2Q9H0D6 ELP2-205ENST00000442325 2722 ntTSL 2 BASIC9.63□□□□□ -0.873e-9■□□□□ 9.1
XRN2Q9H0D6 ELP2-203ENST00000358232 8459 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.873e-9■□□□□ 9.1
XRN2Q9H0D6 EP400NL-210ENST00000537558 861 ntTSL 422.94■■□□□ 1.261e-6■□□□□ 9.1
XRN2Q9H0D6 EP400NL-212ENST00000539351 564 ntTSL 420■□□□□ 0.791e-6■□□□□ 9.1
XRN2Q9H0D6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.94■■□□□ 1.422e-9■□□□□ 9.1
XRN2Q9H0D6 RPS23-204ENST00000507980 836 ntTSL 2 BASIC16.49■□□□□ 0.232e-9■□□□□ 9.1
XRN2Q9H0D6 RPS23-207ENST00000511844 530 ntTSL 2 BASIC16.09■□□□□ 0.172e-9■□□□□ 9.1
XRN2Q9H0D6 RPS23-205ENST00000510019 1019 ntTSL 4 BASIC14.91□□□□□ -0.022e-9■□□□□ 9.1
XRN2Q9H0D6 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.132e-9■□□□□ 9.1
XRN2Q9H0D6 RPS23-208ENST00000512493 443 ntTSL 3 BASIC8.96□□□□□ -0.982e-9■□□□□ 9.1
XRN2Q9H0D6 SCRIB-206ENST00000531163 538 ntTSL 219.83■□□□□ 0.772e-6■□□□□ 9.1
XRN2Q9H0D6 PCK2-213ENST00000560657 559 ntTSL 320.93■□□□□ 0.945e-11■□□□□ 9
XRN2Q9H0D6 AP3D1-209ENST00000591284 580 ntTSL 523■■□□□ 1.275e-10■□□□□ 9
XRN2Q9H0D6 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.25■■■□□ 2.592e-6■□□□□ 9
XRN2Q9H0D6 TRIM28-204ENST00000594806 861 ntTSL 529.83■■■□□ 2.378e-10■□□□□ 9
XRN2Q9H0D6 PYCR2-204ENST00000467298 722 ntTSL 326.57■■□□□ 1.842e-6■□□□□ 9
XRN2Q9H0D6 AKAP8-203ENST00000595416 557 ntTSL 325.04■■□□□ 1.62e-6■□□□□ 9
XRN2Q9H0D6 MAP2K3-210ENST00000527123 535 ntTSL 424.88■■□□□ 1.572e-6■□□□□ 9
XRN2Q9H0D6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.478e-10■□□□□ 9
XRN2Q9H0D6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.368e-10■□□□□ 9
XRN2Q9H0D6 MYH9-210ENST00000486218 788 ntTSL 323.1■■□□□ 1.298e-10■□□□□ 9
XRN2Q9H0D6 STK11-208ENST00000591133 1011 ntTSL 222.8■■□□□ 1.242e-6■□□□□ 9
XRN2Q9H0D6 PNN-205ENST00000556530 601 ntTSL 2 BASIC22.73■■□□□ 1.238e-10■□□□□ 9
XRN2Q9H0D6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.228e-10■□□□□ 9
XRN2Q9H0D6 DGCR8-204ENST00000457069 770 ntTSL 322.43■■□□□ 1.182e-6■□□□□ 9
XRN2Q9H0D6 PCED1A-204ENST00000448755 1170 ntTSL 322.4■■□□□ 1.181e-16■□□□□ 9
XRN2Q9H0D6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.051e-16■□□□□ 9
XRN2Q9H0D6 RARRES2-204ENST00000478771 1907 ntTSL 221.57■■□□□ 1.048e-10■□□□□ 9
XRN2Q9H0D6 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.44■■□□□ 1.028e-10■□□□□ 9
XRN2Q9H0D6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.74■□□□□ 0.911e-16■□□□□ 9
XRN2Q9H0D6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.92e-6■□□□□ 9
XRN2Q9H0D6 PCYT2-217ENST00000574343 693 ntTSL 220.32■□□□□ 0.842e-6■□□□□ 9
XRN2Q9H0D6 TNS3-205ENST00000434451 560 ntTSL 519.84■□□□□ 0.772e-7■□□□□ 9
XRN2Q9H0D6 RARRES2-203ENST00000467793 583 ntTSL 319.43■□□□□ 0.78e-10■□□□□ 9
XRN2Q9H0D6 MYH9-208ENST00000475726 768 ntTSL 319.34■□□□□ 0.698e-10■□□□□ 9
XRN2Q9H0D6 PCED1A-203ENST00000439542 1187 ntTSL 219.25■□□□□ 0.671e-16■□□□□ 9
XRN2Q9H0D6 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.662e-6■□□□□ 9
XRN2Q9H0D6 SNX6-205ENST00000555648 467 ntTSL 318.54■□□□□ 0.562e-6■□□□□ 9
XRN2Q9H0D6 PCYT2-212ENST00000572995 804 ntTSL 318.11■□□□□ 0.492e-6■□□□□ 9
XRN2Q9H0D6 C5orf24-206ENST00000508791 643 ntTSL 318.08■□□□□ 0.482e-6■□□□□ 9
XRN2Q9H0D6 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.05■□□□□ 0.482e-6■□□□□ 9
XRN2Q9H0D6 PCYT2-211ENST00000572924 732 ntTSL 217.38■□□□□ 0.372e-6■□□□□ 9
XRN2Q9H0D6 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.93■□□□□ 0.32e-6■□□□□ 9
XRN2Q9H0D6 TRIM28-209ENST00000597423 733 ntTSL 316.78■□□□□ 0.288e-10■□□□□ 9
XRN2Q9H0D6 PYCR2-205ENST00000472798 422 ntTSL 216.01■□□□□ 0.152e-6■□□□□ 9
XRN2Q9H0D6 MAP2K3-205ENST00000477540 927 ntTSL 214.58□□□□□ -0.082e-6■□□□□ 9
XRN2Q9H0D6 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.49□□□□□ -0.092e-6■□□□□ 9
XRN2Q9H0D6 VIL1-203ENST00000419986 639 ntTSL 314.31□□□□□ -0.128e-10■□□□□ 9
XRN2Q9H0D6 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13.93□□□□□ -0.182e-6■□□□□ 9
XRN2Q9H0D6 NASP-205ENST00000437901 874 ntTSL 513.64□□□□□ -0.232e-6■□□□□ 9
XRN2Q9H0D6 NASP-211ENST00000525515 565 ntTSL 513.59□□□□□ -0.232e-6■□□□□ 9
XRN2Q9H0D6 NASP-204ENST00000437362 999 ntTSL 213.46□□□□□ -0.252e-6■□□□□ 9
XRN2Q9H0D6 NASP-212ENST00000527359 743 ntTSL 313.44□□□□□ -0.262e-6■□□□□ 9
XRN2Q9H0D6 PNN-203ENST00000554117 624 ntTSL 212.94□□□□□ -0.348e-10■□□□□ 9
XRN2Q9H0D6 TRIM28-210ENST00000597618 609 ntTSL 212.71□□□□□ -0.378e-10■□□□□ 9
XRN2Q9H0D6 NASP-202ENST00000351223 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.492e-6■□□□□ 9
XRN2Q9H0D6 NASP-216ENST00000528238 894 ntAPPRIS ALT2 TSL 511.56□□□□□ -0.562e-6■□□□□ 9
XRN2Q9H0D6 ACSL3-204ENST00000413316 650 ntTSL 411.36□□□□□ -0.598e-10■□□□□ 9
XRN2Q9H0D6 TRIM28-208ENST00000597172 577 ntTSL 211.28□□□□□ -0.68e-10■□□□□ 9
XRN2Q9H0D6 PYCR2-207ENST00000489681 597 ntTSL 311.22□□□□□ -0.612e-6■□□□□ 9
XRN2Q9H0D6 AC097478.1-206ENST00000513572 2010 ntTSL 3 BASIC11.03□□□□□ -0.642e-6■□□□□ 9
XRN2Q9H0D6 IGF2BP2-210ENST00000494906 918 ntTSL 510.34□□□□□ -0.758e-10■□□□□ 9
XRN2Q9H0D6 NASP-206ENST00000453748 2080 ntTSL 210.19□□□□□ -0.782e-6■□□□□ 9
XRN2Q9H0D6 NASP-201ENST00000350030 3207 ntAPPRIS P4 TSL 1 (best) BASIC8.76□□□□□ -1.012e-6■□□□□ 9
XRN2Q9H0D6 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.078e-10■□□□□ 9
XRN2Q9H0D6 NASP-224ENST00000537798 3097 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.082e-6■□□□□ 9
XRN2Q9H0D6 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.122e-6■□□□□ 9
XRN2Q9H0D6 AC097478.1-205ENST00000507916 602 ntTSL 36.75□□□□□ -1.332e-6■□□□□ 9
XRN2Q9H0D6 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.352e-6■□□□□ 9
XRN2Q9H0D6 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.99□□□□□ -1.612e-6■□□□□ 9
XRN2Q9H0D6 GREB1-202ENST00000263834 2448 ntTSL 1 (best) BASIC11.29□□□□□ -0.68e-7■□□□□ 9
XRN2Q9H0D6 SDCCAG3-203ENST00000371723 865 ntTSL 230.51■■■□□ 2.478e-6■□□□□ 9
XRN2Q9H0D6 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC29.72■■■□□ 2.358e-6■□□□□ 9
XRN2Q9H0D6 INTS6-205ENST00000461515 602 ntTSL 229.45■■■□□ 2.314e-8■□□□□ 9
XRN2Q9H0D6 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC29.4■■■□□ 2.38e-6■□□□□ 9
XRN2Q9H0D6 DALRD3-213ENST00000496568 839 ntTSL 228.32■■■□□ 2.128e-6■□□□□ 9
XRN2Q9H0D6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.89■■□□□ 1.98e-6■□□□□ 9
XRN2Q9H0D6 DALRD3-212ENST00000492585 561 ntTSL 326.46■■□□□ 1.838e-6■□□□□ 9
XRN2Q9H0D6 CDK6-205ENST00000491250 558 ntTSL 425.1■■□□□ 1.618e-6■□□□□ 9
XRN2Q9H0D6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC24.82■■□□□ 1.562e-7■□□□□ 9
XRN2Q9H0D6 FNIP1-206ENST00000623690 1373 nt24.52■■□□□ 1.528e-6■□□□□ 9
XRN2Q9H0D6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC24.04■■□□□ 1.442e-7■□□□□ 9
XRN2Q9H0D6 FOXP1-211ENST00000485326 795 ntTSL 323.67■■□□□ 1.388e-6■□□□□ 9
XRN2Q9H0D6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.378e-6■□□□□ 9
XRN2Q9H0D6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC23.42■■□□□ 1.348e-6■□□□□ 9
XRN2Q9H0D6 LINC01311-201ENST00000565162 1445 ntBASIC21.85■■□□□ 1.098e-6■□□□□ 9
XRN2Q9H0D6 FAAP20-212ENST00000476803 701 ntTSL 221.58■■□□□ 1.058e-6■□□□□ 9
XRN2Q9H0D6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.55■□□□□ 0.888e-6■□□□□ 9
Retrieved 100 of 21,068 protein–RNA pairs in 577 ms