Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 AC067863.1-201ENST00000494933 530 ntBASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 AL512361.1-201ENST00000554200 418 ntBASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCSER1Q9C0I3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 AC125807.1-201ENST00000483097 614 ntBASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 AC069120.2-201ENST00000524091 540 ntBASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 AC093028.1-201ENST00000622998 982 ntBASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCSER1Q9C0I3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 AC107890.1-201ENST00000422478 521 ntBASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 AC092580.3-201ENST00000430932 139 ntBASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 AL109954.1-202ENST00000564051 2148 ntBASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCSER1Q9C0I3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms