Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 ECM1P1-201ENST00000604092 1279 ntBASIC20.34■□□□□ 0.85
PCDH11XQ9BZA7 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC20.34■□□□□ 0.85
PCDH11XQ9BZA7 ETV2-208ENST00000621247 941 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDH11XQ9BZA7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH11XQ9BZA7 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDH11XQ9BZA7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH11XQ9BZA7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH11XQ9BZA7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.34■□□□□ 0.85
PCDH11XQ9BZA7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH11XQ9BZA7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH11XQ9BZA7 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH11XQ9BZA7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH11XQ9BZA7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH11XQ9BZA7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH11XQ9BZA7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH11XQ9BZA7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDH11XQ9BZA7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDH11XQ9BZA7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
PCDH11XQ9BZA7 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDH11XQ9BZA7 AC004898.1-201ENST00000451057 766 ntBASIC20.33■□□□□ 0.85
PCDH11XQ9BZA7 IGHJ2P-201ENST00000454480 60 ntBASIC20.33■□□□□ 0.85
PCDH11XQ9BZA7 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC20.33■□□□□ 0.85
PCDH11XQ9BZA7 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC20.33■□□□□ 0.85
PCDH11XQ9BZA7 RHOQP1-201ENST00000555758 579 ntBASIC20.33■□□□□ 0.85
PCDH11XQ9BZA7 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDH11XQ9BZA7 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDH11XQ9BZA7 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC20.33■□□□□ 0.85
PCDH11XQ9BZA7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDH11XQ9BZA7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC20.33■□□□□ 0.85
PCDH11XQ9BZA7 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDH11XQ9BZA7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDH11XQ9BZA7 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC20.33■□□□□ 0.84
PCDH11XQ9BZA7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDH11XQ9BZA7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDH11XQ9BZA7 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
PCDH11XQ9BZA7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH11XQ9BZA7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDH11XQ9BZA7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
PCDH11XQ9BZA7 AGGF1P2-201ENST00000426656 2106 ntBASIC20.32■□□□□ 0.84
PCDH11XQ9BZA7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PCDH11XQ9BZA7 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC20.32■□□□□ 0.84
PCDH11XQ9BZA7 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
PCDH11XQ9BZA7 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC20.32■□□□□ 0.84
PCDH11XQ9BZA7 AC015818.8-201ENST00000587907 1519 ntBASIC20.32■□□□□ 0.84
PCDH11XQ9BZA7 AC022211.2-201ENST00000585075 2527 ntBASIC20.32■□□□□ 0.84
PCDH11XQ9BZA7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH11XQ9BZA7 AC011676.5-201ENST00000624864 2660 ntBASIC20.32■□□□□ 0.84
PCDH11XQ9BZA7 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PCDH11XQ9BZA7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PCDH11XQ9BZA7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH11XQ9BZA7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC20.32■□□□□ 0.84
PCDH11XQ9BZA7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PCDH11XQ9BZA7 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDH11XQ9BZA7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDH11XQ9BZA7 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH11XQ9BZA7 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH11XQ9BZA7 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PCDH11XQ9BZA7 MPV17-205ENST00000402310 906 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDH11XQ9BZA7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDH11XQ9BZA7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PCDH11XQ9BZA7 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH11XQ9BZA7 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH11XQ9BZA7 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH11XQ9BZA7 RN7SL48P-201ENST00000579283 293 ntBASIC20.31■□□□□ 0.84
PCDH11XQ9BZA7 CYGB-203ENST00000589145 788 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDH11XQ9BZA7 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PCDH11XQ9BZA7 AC244452.3-201ENST00000636814 210 ntBASIC20.31■□□□□ 0.84
PCDH11XQ9BZA7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDH11XQ9BZA7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH11XQ9BZA7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH11XQ9BZA7 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH11XQ9BZA7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH11XQ9BZA7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PCDH11XQ9BZA7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH11XQ9BZA7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH11XQ9BZA7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDH11XQ9BZA7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PCDH11XQ9BZA7 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PCDH11XQ9BZA7 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH11XQ9BZA7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH11XQ9BZA7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PCDH11XQ9BZA7 AC005332.8-201ENST00000622750 2735 ntBASIC20.31■□□□□ 0.84
PCDH11XQ9BZA7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PCDH11XQ9BZA7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 SLC25A24P2-201ENST00000415059 510 ntBASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 PARP8-218ENST00000513738 596 ntTSL 4 BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 SCARNA20.5-201ENST00000516991 142 ntBASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC20.3■□□□□ 0.84
PCDH11XQ9BZA7 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms