Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 AC005237.2-201ENST00000434368 219 ntBASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 AC026150.2-201ENST00000564693 1156 ntBASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 AC055717.3-201ENST00000622967 595 ntBASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RSPO3Q9BXY4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 RPSAP43-201ENST00000402237 625 ntBASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 TARDBPP1-201ENST00000442013 1203 ntBASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 AC099063.4-201ENST00000641099 1602 ntBASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 AC148477.4-201ENST00000613430 1793 ntBASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RSPO3Q9BXY4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 CICP11-201ENST00000434745 2827 ntBASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 KRT18P32-201ENST00000424695 1287 ntBASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.53□□□□□ -0.08
RSPO3Q9BXY4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms