Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAF4Q9BUZ4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAF4Q9BUZ4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.3□□□□□ -0.12
TRAF4Q9BUZ4 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAF4Q9BUZ4 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 AL390955.2-201ENST00000603032 514 ntBASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 TUBB3P1-201ENST00000405796 1332 ntBASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 AL021920.2-201ENST00000624828 1351 ntBASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 AC131009.4-201ENST00000624048 1740 ntBASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 AL645728.1-201ENST00000366221 2101 ntBASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF4Q9BUZ4 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 AC139749.1-202ENST00000617529 3139 ntBASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 KLF2P3-201ENST00000451977 1087 ntBASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 AC093214.1-201ENST00000511688 1107 ntBASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 RNA5SP421-201ENST00000516864 134 ntBASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 AC026150.2-201ENST00000564693 1156 ntBASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 KRT8P49-201ENST00000604166 1432 ntBASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 AC008267.7-201ENST00000624570 1194 ntBASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 AC015656.1-201ENST00000624209 3578 ntBASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAF4Q9BUZ4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms