Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 AC104109.2-201ENST00000602919 1418 ntBASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SHANK2-AS3Q9BTD1 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.44
SHANK2-AS3Q9BTD1 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
SHANK2-AS3Q9BTD1 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SHANK2-AS3Q9BTD1 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
SHANK2-AS3Q9BTD1 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.27□□□□□ -0.44
SHANK2-AS3Q9BTD1 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
SHANK2-AS3Q9BTD1 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SHANK2-AS3Q9BTD1 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SHANK2-AS3Q9BTD1 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SHANK2-AS3Q9BTD1 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SHANK2-AS3Q9BTD1 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SHANK2-AS3Q9BTD1 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SHANK2-AS3Q9BTD1 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.27□□□□□ -0.44
SHANK2-AS3Q9BTD1 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SHANK2-AS3Q9BTD1 AC018892.3-201ENST00000623986 2499 ntBASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 AC034105.1-201ENST00000563488 319 ntBASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 MIR4313-201ENST00000580760 101 ntBASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
SHANK2-AS3Q9BTD1 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 TCAF2P1-201ENST00000291129 2421 ntBASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 AC127383.1-201ENST00000444697 1800 ntBASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 RPS8P6-201ENST00000426177 609 ntBASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 KRT18P2-201ENST00000447938 1258 ntBASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.26□□□□□ -0.45
SHANK2-AS3Q9BTD1 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms