Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 WASH6P-202ENST00000359512 1437 ntBASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 AC093909.1-201ENST00000504731 1122 ntBASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 AL138918.1-201ENST00000568306 659 ntBASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 AP001005.1-201ENST00000571755 1248 ntBASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 Z83851.2-201ENST00000609564 659 ntBASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HDHD3Q9BSH5 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.46□□□□□ -0.25
HDHD3Q9BSH5 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.46□□□□□ -0.26
HDHD3Q9BSH5 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
HDHD3Q9BSH5 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HDHD3Q9BSH5 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.46□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms