Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC12.13□□□□□ -0.47
VGLL1Q99990 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.13□□□□□ -0.47
VGLL1Q99990 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.13□□□□□ -0.47
VGLL1Q99990 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VGLL1Q99990 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
VGLL1Q99990 AC092127.1-201ENST00000567093 3455 ntBASIC12.13□□□□□ -0.47
VGLL1Q99990 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VGLL1Q99990 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VGLL1Q99990 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.13□□□□□ -0.47
VGLL1Q99990 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VGLL1Q99990 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VGLL1Q99990 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VGLL1Q99990 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
VGLL1Q99990 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.12□□□□□ -0.47
VGLL1Q99990 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.12□□□□□ -0.47
VGLL1Q99990 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VGLL1Q99990 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VGLL1Q99990 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC12.12□□□□□ -0.47
VGLL1Q99990 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
VGLL1Q99990 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VGLL1Q99990 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.12□□□□□ -0.47
VGLL1Q99990 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
VGLL1Q99990 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
VGLL1Q99990 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
VGLL1Q99990 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.12□□□□□ -0.47
VGLL1Q99990 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.12□□□□□ -0.47
VGLL1Q99990 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VGLL1Q99990 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
VGLL1Q99990 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
VGLL1Q99990 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.12□□□□□ -0.47
VGLL1Q99990 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.12□□□□□ -0.47
VGLL1Q99990 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
VGLL1Q99990 CRYGEP-201ENST00000412192 528 ntBASIC12.12□□□□□ -0.47
VGLL1Q99990 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC12.12□□□□□ -0.47
VGLL1Q99990 AC245100.5-201ENST00000452108 331 ntBASIC12.12□□□□□ -0.47
VGLL1Q99990 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC12.12□□□□□ -0.47
VGLL1Q99990 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC12.12□□□□□ -0.47
VGLL1Q99990 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.12□□□□□ -0.47
VGLL1Q99990 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.12□□□□□ -0.47
VGLL1Q99990 TCAP-202ENST00000578283 583 ntTSL 5 BASIC12.12□□□□□ -0.47
VGLL1Q99990 CD7-202ENST00000578509 925 ntTSL 3 BASIC12.12□□□□□ -0.47
VGLL1Q99990 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC12.12□□□□□ -0.47
VGLL1Q99990 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC12.12□□□□□ -0.47
VGLL1Q99990 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
VGLL1Q99990 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VGLL1Q99990 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
VGLL1Q99990 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VGLL1Q99990 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
VGLL1Q99990 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
VGLL1Q99990 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.12□□□□□ -0.47
VGLL1Q99990 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.12□□□□□ -0.47
VGLL1Q99990 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
VGLL1Q99990 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VGLL1Q99990 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.12□□□□□ -0.47
VGLL1Q99990 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
VGLL1Q99990 AC073439.1-201ENST00000624121 1774 ntBASIC12.12□□□□□ -0.47
VGLL1Q99990 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VGLL1Q99990 AC134407.2-201ENST00000625089 1978 ntBASIC12.12□□□□□ -0.47
VGLL1Q99990 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VGLL1Q99990 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
VGLL1Q99990 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.12□□□□□ -0.47
VGLL1Q99990 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
VGLL1Q99990 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
VGLL1Q99990 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VGLL1Q99990 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.12□□□□□ -0.47
VGLL1Q99990 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
VGLL1Q99990 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VGLL1Q99990 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VGLL1Q99990 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VGLL1Q99990 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.12□□□□□ -0.47
VGLL1Q99990 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.12□□□□□ -0.47
VGLL1Q99990 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VGLL1Q99990 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VGLL1Q99990 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
VGLL1Q99990 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
VGLL1Q99990 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
VGLL1Q99990 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.11□□□□□ -0.47
VGLL1Q99990 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
VGLL1Q99990 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VGLL1Q99990 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VGLL1Q99990 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VGLL1Q99990 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VGLL1Q99990 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.11□□□□□ -0.47
VGLL1Q99990 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VGLL1Q99990 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VGLL1Q99990 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
VGLL1Q99990 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
VGLL1Q99990 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
VGLL1Q99990 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
VGLL1Q99990 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
VGLL1Q99990 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VGLL1Q99990 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VGLL1Q99990 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VGLL1Q99990 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
VGLL1Q99990 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VGLL1Q99990 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VGLL1Q99990 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.11□□□□□ -0.47
VGLL1Q99990 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VGLL1Q99990 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VGLL1Q99990 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms