Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TM9SF2Q99805 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.85□□□□□ -0.03
TM9SF2Q99805 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TM9SF2Q99805 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TM9SF2Q99805 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TM9SF2Q99805 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TM9SF2Q99805 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TM9SF2Q99805 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.84□□□□□ -0.03
TM9SF2Q99805 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF2Q99805 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
TM9SF2Q99805 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF2Q99805 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.84□□□□□ -0.03
TM9SF2Q99805 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF2Q99805 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.84□□□□□ -0.03
TM9SF2Q99805 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF2Q99805 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF2Q99805 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.84□□□□□ -0.03
TM9SF2Q99805 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.84□□□□□ -0.03
TM9SF2Q99805 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
TM9SF2Q99805 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.84□□□□□ -0.03
TM9SF2Q99805 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TM9SF2Q99805 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF2Q99805 CNN2P2-201ENST00000443536 909 ntBASIC14.84□□□□□ -0.03
TM9SF2Q99805 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF2Q99805 CNN2P3-201ENST00000450201 906 ntBASIC14.84□□□□□ -0.03
TM9SF2Q99805 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.84□□□□□ -0.03
TM9SF2Q99805 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.84□□□□□ -0.03
TM9SF2Q99805 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.84□□□□□ -0.03
TM9SF2Q99805 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.84□□□□□ -0.03
TM9SF2Q99805 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.84□□□□□ -0.03
TM9SF2Q99805 AC109322.1-201ENST00000524499 1264 ntBASIC14.84□□□□□ -0.03
TM9SF2Q99805 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF2Q99805 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF2Q99805 AL136317.3-201ENST00000618497 906 ntBASIC14.84□□□□□ -0.03
TM9SF2Q99805 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.84□□□□□ -0.03
TM9SF2Q99805 AL139011.1-202ENST00000642063 584 ntBASIC14.84□□□□□ -0.03
TM9SF2Q99805 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF2Q99805 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.84□□□□□ -0.03
TM9SF2Q99805 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.84□□□□□ -0.03
TM9SF2Q99805 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.84□□□□□ -0.03
TM9SF2Q99805 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.84□□□□□ -0.03
TM9SF2Q99805 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TM9SF2Q99805 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF2Q99805 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.84□□□□□ -0.03
TM9SF2Q99805 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TM9SF2Q99805 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.84□□□□□ -0.03
TM9SF2Q99805 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.84□□□□□ -0.03
TM9SF2Q99805 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF2Q99805 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF2Q99805 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TM9SF2Q99805 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF2Q99805 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF2Q99805 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF2Q99805 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF2Q99805 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF2Q99805 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF2Q99805 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TM9SF2Q99805 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TM9SF2Q99805 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TM9SF2Q99805 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TM9SF2Q99805 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.83□□□□□ -0.03
TM9SF2Q99805 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TM9SF2Q99805 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TM9SF2Q99805 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
TM9SF2Q99805 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
TM9SF2Q99805 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
TM9SF2Q99805 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.83□□□□□ -0.04
TM9SF2Q99805 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF2Q99805 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF2Q99805 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF2Q99805 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TM9SF2Q99805 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF2Q99805 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.83□□□□□ -0.04
TM9SF2Q99805 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.83□□□□□ -0.04
TM9SF2Q99805 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF2Q99805 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.83□□□□□ -0.04
TM9SF2Q99805 AL512356.2-201ENST00000546955 174 ntBASIC14.83□□□□□ -0.04
TM9SF2Q99805 LINC01225-203ENST00000563550 1244 ntBASIC14.83□□□□□ -0.04
TM9SF2Q99805 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TM9SF2Q99805 AC015911.4-201ENST00000588022 1070 ntBASIC14.83□□□□□ -0.04
TM9SF2Q99805 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.83□□□□□ -0.04
TM9SF2Q99805 AP001059.3-201ENST00000619053 235 ntBASIC14.83□□□□□ -0.04
TM9SF2Q99805 AC084121.4-201ENST00000641598 221 ntBASIC14.83□□□□□ -0.04
TM9SF2Q99805 AF228730.8-201ENST00000642140 221 ntBASIC14.83□□□□□ -0.04
TM9SF2Q99805 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF2Q99805 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF2Q99805 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.83□□□□□ -0.04
TM9SF2Q99805 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TM9SF2Q99805 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF2Q99805 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.83□□□□□ -0.04
TM9SF2Q99805 AC016027.1-202ENST00000607927 1699 ntBASIC14.83□□□□□ -0.04
TM9SF2Q99805 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
TM9SF2Q99805 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF2Q99805 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TM9SF2Q99805 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.83□□□□□ -0.04
TM9SF2Q99805 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF2Q99805 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TM9SF2Q99805 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF2Q99805 CICP4-201ENST00000447359 2812 ntBASIC14.83□□□□□ -0.04
TM9SF2Q99805 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms