Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NDNQ99608 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
NDNQ99608 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.02■□□□□ 0.15
NDNQ99608 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NDNQ99608 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
NDNQ99608 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
NDNQ99608 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NDNQ99608 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
NDNQ99608 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.01■□□□□ 0.15
NDNQ99608 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
NDNQ99608 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NDNQ99608 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NDNQ99608 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
NDNQ99608 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NDNQ99608 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
NDNQ99608 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.01■□□□□ 0.15
NDNQ99608 MCCD1P2-201ENST00000423228 335 ntBASIC16.01■□□□□ 0.15
NDNQ99608 AC142381.1-201ENST00000426099 345 ntBASIC16.01■□□□□ 0.15
NDNQ99608 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.01■□□□□ 0.15
NDNQ99608 TIMM8BP1-201ENST00000452384 211 ntBASIC16.01■□□□□ 0.15
NDNQ99608 ALG1L5P-201ENST00000482043 771 ntBASIC16.01■□□□□ 0.15
NDNQ99608 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.01■□□□□ 0.15
NDNQ99608 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.01■□□□□ 0.15
NDNQ99608 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.01■□□□□ 0.15
NDNQ99608 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.01■□□□□ 0.15
NDNQ99608 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.01■□□□□ 0.15
NDNQ99608 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.01■□□□□ 0.15
NDNQ99608 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.01■□□□□ 0.15
NDNQ99608 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.01■□□□□ 0.15
NDNQ99608 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NDNQ99608 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NDNQ99608 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NDNQ99608 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NDNQ99608 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NDNQ99608 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NDNQ99608 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.01■□□□□ 0.15
NDNQ99608 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.01■□□□□ 0.15
NDNQ99608 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NDNQ99608 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NDNQ99608 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
NDNQ99608 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.01■□□□□ 0.15
NDNQ99608 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
NDNQ99608 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NDNQ99608 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
NDNQ99608 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16■□□□□ 0.15
NDNQ99608 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NDNQ99608 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16■□□□□ 0.15
NDNQ99608 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
NDNQ99608 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
NDNQ99608 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16■□□□□ 0.15
NDNQ99608 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NDNQ99608 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16■□□□□ 0.15
NDNQ99608 AC011477.6-201ENST00000604980 1927 ntBASIC16■□□□□ 0.15
NDNQ99608 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
NDNQ99608 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
NDNQ99608 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NDNQ99608 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
NDNQ99608 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16■□□□□ 0.15
NDNQ99608 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NDNQ99608 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16■□□□□ 0.15
NDNQ99608 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NDNQ99608 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NDNQ99608 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16■□□□□ 0.15
NDNQ99608 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16■□□□□ 0.15
NDNQ99608 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16■□□□□ 0.15
NDNQ99608 SPCS2P4-201ENST00000436160 681 ntBASIC16■□□□□ 0.15
NDNQ99608 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16■□□□□ 0.15
NDNQ99608 SPDYE11-202ENST00000450699 704 ntBASIC16■□□□□ 0.15
NDNQ99608 RN7SL589P-201ENST00000481268 310 ntBASIC16■□□□□ 0.15
NDNQ99608 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16■□□□□ 0.15
NDNQ99608 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16■□□□□ 0.15
NDNQ99608 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16■□□□□ 0.15
NDNQ99608 SPDYE9P-201ENST00000570642 692 ntBASIC16■□□□□ 0.15
NDNQ99608 AC061975.2-201ENST00000581722 295 ntBASIC16■□□□□ 0.15
NDNQ99608 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16■□□□□ 0.15
NDNQ99608 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16■□□□□ 0.15
NDNQ99608 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16■□□□□ 0.15
NDNQ99608 AL671883.3-201ENST00000603274 991 ntBASIC16■□□□□ 0.15
NDNQ99608 SPDYE10P-202ENST00000612005 668 ntBASIC16■□□□□ 0.15
NDNQ99608 SPDYE8P-202ENST00000612377 668 ntBASIC16■□□□□ 0.15
NDNQ99608 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16■□□□□ 0.15
NDNQ99608 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16■□□□□ 0.15
NDNQ99608 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16■□□□□ 0.15
NDNQ99608 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16■□□□□ 0.15
NDNQ99608 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
NDNQ99608 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NDNQ99608 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16■□□□□ 0.15
NDNQ99608 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
NDNQ99608 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
NDNQ99608 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
NDNQ99608 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NDNQ99608 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16■□□□□ 0.15
NDNQ99608 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16■□□□□ 0.15
NDNQ99608 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NDNQ99608 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16■□□□□ 0.15
NDNQ99608 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16■□□□□ 0.15
NDNQ99608 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16■□□□□ 0.15
NDNQ99608 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
NDNQ99608 DKFZP434H168-201ENST00000567381 1905 ntBASIC16■□□□□ 0.15
NDNQ99608 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms