Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
TRGV9Q99603 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV9Q99603 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV9Q99603 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV9Q99603 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
TRGV9Q99603 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.43□□□□□ -0.42
TRGV9Q99603 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV9Q99603 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
TRGV9Q99603 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.43□□□□□ -0.42
TRGV9Q99603 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.43□□□□□ -0.42
TRGV9Q99603 RPS8P6-201ENST00000426177 609 ntBASIC12.43□□□□□ -0.42
TRGV9Q99603 AL450487.1-201ENST00000426799 995 ntBASIC12.43□□□□□ -0.42
TRGV9Q99603 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC12.43□□□□□ -0.42
TRGV9Q99603 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.43□□□□□ -0.42
TRGV9Q99603 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC12.43□□□□□ -0.42
TRGV9Q99603 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC12.43□□□□□ -0.42
TRGV9Q99603 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC12.43□□□□□ -0.42
TRGV9Q99603 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
TRGV9Q99603 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.43□□□□□ -0.42
TRGV9Q99603 PDPK2P-202ENST00000562415 1191 ntBASIC12.43□□□□□ -0.42
TRGV9Q99603 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.43□□□□□ -0.42
TRGV9Q99603 AP002472.1-201ENST00000577490 586 ntBASIC12.43□□□□□ -0.42
TRGV9Q99603 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.43□□□□□ -0.42
TRGV9Q99603 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
TRGV9Q99603 OR2I1P-209ENST00000641730 5365 ntBASIC12.43□□□□□ -0.42
TRGV9Q99603 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
TRGV9Q99603 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.43□□□□□ -0.42
TRGV9Q99603 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV9Q99603 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV9Q99603 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV9Q99603 TCAF2P1-201ENST00000291129 2421 ntBASIC12.43□□□□□ -0.42
TRGV9Q99603 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.43□□□□□ -0.42
TRGV9Q99603 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.43□□□□□ -0.42
TRGV9Q99603 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.43□□□□□ -0.42
TRGV9Q99603 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.43□□□□□ -0.42
TRGV9Q99603 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
TRGV9Q99603 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV9Q99603 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV9Q99603 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.43□□□□□ -0.42
TRGV9Q99603 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.43□□□□□ -0.42
TRGV9Q99603 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.43□□□□□ -0.42
TRGV9Q99603 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
TRGV9Q99603 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV9Q99603 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRGV9Q99603 KRT8P44-201ENST00000441609 1350 ntBASIC12.43□□□□□ -0.42
TRGV9Q99603 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV9Q99603 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
TRGV9Q99603 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.42□□□□□ -0.42
TRGV9Q99603 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV9Q99603 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV9Q99603 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV9Q99603 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV9Q99603 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.42□□□□□ -0.42
TRGV9Q99603 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
TRGV9Q99603 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV9Q99603 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
TRGV9Q99603 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.42□□□□□ -0.42
TRGV9Q99603 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV9Q99603 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV9Q99603 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
TRGV9Q99603 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV9Q99603 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV9Q99603 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV9Q99603 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV9Q99603 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV9Q99603 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.42□□□□□ -0.42
TRGV9Q99603 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.42□□□□□ -0.42
TRGV9Q99603 AL138918.1-201ENST00000568306 659 ntBASIC12.42□□□□□ -0.42
TRGV9Q99603 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.42□□□□□ -0.42
TRGV9Q99603 SLC25A6P4-201ENST00000586535 553 ntBASIC12.42□□□□□ -0.42
TRGV9Q99603 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV9Q99603 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV9Q99603 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV9Q99603 AL450472.2-201ENST00000603663 1156 ntBASIC12.42□□□□□ -0.42
TRGV9Q99603 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.42□□□□□ -0.42
TRGV9Q99603 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV9Q99603 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV9Q99603 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.42□□□□□ -0.42
TRGV9Q99603 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV9Q99603 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV9Q99603 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.42□□□□□ -0.42
TRGV9Q99603 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.42□□□□□ -0.42
TRGV9Q99603 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV9Q99603 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV9Q99603 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.42□□□□□ -0.42
TRGV9Q99603 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV9Q99603 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV9Q99603 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.42□□□□□ -0.42
TRGV9Q99603 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV9Q99603 LINC01101-201ENST00000622953 1884 ntBASIC12.42□□□□□ -0.42
TRGV9Q99603 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.42□□□□□ -0.42
TRGV9Q99603 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
TRGV9Q99603 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV9Q99603 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV9Q99603 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV9Q99603 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV9Q99603 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
TRGV9Q99603 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV9Q99603 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.42□□□□□ -0.42
TRGV9Q99603 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms