Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.99■□□□□ 0.47
SYNGAP1Q96PV0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.99■□□□□ 0.47
SYNGAP1Q96PV0 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SYNGAP1Q96PV0 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 TDH-203ENST00000531764 1110 ntBASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 KLF2P4-201ENST00000451959 1225 ntBASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 CTBP2P5-201ENST00000454986 1264 ntBASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 AC124283.3-201ENST00000570869 594 ntBASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.98■□□□□ 0.47
SYNGAP1Q96PV0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 AC006449.5-201ENST00000610658 2098 ntBASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 INTS4P2-202ENST00000614726 2019 ntBASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 PCDH8P1-201ENST00000428983 2773 ntBASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 AP001282.1-201ENST00000531301 1499 ntBASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 FAM86MP-201ENST00000340703 885 ntBASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 AC005229.1-201ENST00000392885 409 ntBASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 SLED1-202ENST00000512051 380 ntBASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 MIR4525-201ENST00000580000 75 ntBASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SYNGAP1Q96PV0 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SYNGAP1Q96PV0 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SYNGAP1Q96PV0 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
SYNGAP1Q96PV0 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SYNGAP1Q96PV0 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.96■□□□□ 0.47
SYNGAP1Q96PV0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SYNGAP1Q96PV0 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SYNGAP1Q96PV0 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SYNGAP1Q96PV0 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SYNGAP1Q96PV0 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SYNGAP1Q96PV0 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.96■□□□□ 0.47
SYNGAP1Q96PV0 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SYNGAP1Q96PV0 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms