Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRC3BQ96PB8 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 AC124067.4-201ENST00000519691 2379 ntBASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 AL138799.1-201ENST00000448213 1675 ntBASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 AC006001.1-201ENST00000325130 474 ntBASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 FAM197Y7-201ENST00000432892 766 ntBASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 AC078819.1-201ENST00000547454 765 ntBASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 AC012085.1-201ENST00000548270 765 ntBASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 AC079316.1-201ENST00000548397 411 ntBASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 AC145423.3-201ENST00000615987 467 ntBASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRC3BQ96PB8 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 C2orf27AP3-201ENST00000434123 579 ntBASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 RN7SL560P-201ENST00000577943 264 ntBASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 AP005019.2-201ENST00000615104 511 ntBASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 AL354718.3-201ENST00000616414 581 ntBASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 CR382287.1-201ENST00000623954 586 ntBASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC3BQ96PB8 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC3BQ96PB8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC3BQ96PB8 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LRRC3BQ96PB8 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
LRRC3BQ96PB8 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LRRC3BQ96PB8 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC3BQ96PB8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms