Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.72□□□□□ -0.21
CMTM3Q96MX0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.72□□□□□ -0.21
CMTM3Q96MX0 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.71□□□□□ -0.21
CMTM3Q96MX0 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
CMTM3Q96MX0 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CMTM3Q96MX0 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CMTM3Q96MX0 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CMTM3Q96MX0 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CMTM3Q96MX0 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CMTM3Q96MX0 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CMTM3Q96MX0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.71□□□□□ -0.21
CMTM3Q96MX0 MYO15B-237ENST00000642007 4893 ntBASIC13.71□□□□□ -0.21
CMTM3Q96MX0 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CMTM3Q96MX0 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.71□□□□□ -0.21
CMTM3Q96MX0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CMTM3Q96MX0 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CMTM3Q96MX0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.71□□□□□ -0.21
CMTM3Q96MX0 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
CMTM3Q96MX0 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CMTM3Q96MX0 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CMTM3Q96MX0 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.71□□□□□ -0.21
CMTM3Q96MX0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CMTM3Q96MX0 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.71□□□□□ -0.21
CMTM3Q96MX0 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC13.71□□□□□ -0.21
CMTM3Q96MX0 HMGA1P7-201ENST00000406908 502 ntBASIC13.71□□□□□ -0.21
CMTM3Q96MX0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.71□□□□□ -0.21
CMTM3Q96MX0 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
CMTM3Q96MX0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.71□□□□□ -0.21
CMTM3Q96MX0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.71□□□□□ -0.21
CMTM3Q96MX0 AP000867.3-201ENST00000524675 377 ntBASIC13.71□□□□□ -0.21
CMTM3Q96MX0 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.71□□□□□ -0.21
CMTM3Q96MX0 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
CMTM3Q96MX0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.71□□□□□ -0.21
CMTM3Q96MX0 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.71□□□□□ -0.21
CMTM3Q96MX0 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.71□□□□□ -0.21
CMTM3Q96MX0 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.71□□□□□ -0.21
CMTM3Q96MX0 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CMTM3Q96MX0 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
CMTM3Q96MX0 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
CMTM3Q96MX0 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CMTM3Q96MX0 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CMTM3Q96MX0 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.71□□□□□ -0.22
CMTM3Q96MX0 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CMTM3Q96MX0 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.71□□□□□ -0.22
CMTM3Q96MX0 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CMTM3Q96MX0 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CMTM3Q96MX0 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.71□□□□□ -0.22
CMTM3Q96MX0 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CMTM3Q96MX0 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
CMTM3Q96MX0 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
CMTM3Q96MX0 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
CMTM3Q96MX0 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CMTM3Q96MX0 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
CMTM3Q96MX0 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.7□□□□□ -0.22
CMTM3Q96MX0 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CMTM3Q96MX0 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CMTM3Q96MX0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CMTM3Q96MX0 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.7□□□□□ -0.22
CMTM3Q96MX0 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.7□□□□□ -0.22
CMTM3Q96MX0 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CMTM3Q96MX0 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.7□□□□□ -0.22
CMTM3Q96MX0 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CMTM3Q96MX0 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.7□□□□□ -0.22
CMTM3Q96MX0 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CMTM3Q96MX0 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CMTM3Q96MX0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
CMTM3Q96MX0 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.7□□□□□ -0.22
CMTM3Q96MX0 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CMTM3Q96MX0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CMTM3Q96MX0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CMTM3Q96MX0 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CMTM3Q96MX0 LAGE3P1-201ENST00000425356 484 ntBASIC13.7□□□□□ -0.22
CMTM3Q96MX0 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
CMTM3Q96MX0 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC13.7□□□□□ -0.22
CMTM3Q96MX0 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.7□□□□□ -0.22
CMTM3Q96MX0 KRT18P34-201ENST00000488218 1270 ntBASIC13.7□□□□□ -0.22
CMTM3Q96MX0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC13.7□□□□□ -0.22
CMTM3Q96MX0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms