Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 AC023141.13-201ENST00000604991 943 ntBASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 AL365330.1-201ENST00000607459 531 ntBASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 AL513190.1-201ENST00000621254 727 ntBASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 HLA-A-201ENST00000376802 1334 ntBASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHAMP1Q96JM3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHAMP1Q96JM3 CICP4-201ENST00000447359 2812 ntBASIC18.46■□□□□ 0.55
CHAMP1Q96JM3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHAMP1Q96JM3 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHAMP1Q96JM3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CHAMP1Q96JM3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CHAMP1Q96JM3 FAM45BP-202ENST00000592932 1624 ntBASIC18.46■□□□□ 0.55
CHAMP1Q96JM3 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHAMP1Q96JM3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC18.46■□□□□ 0.55
CHAMP1Q96JM3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHAMP1Q96JM3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CHAMP1Q96JM3 RPS2P28-201ENST00000314255 741 ntBASIC18.46■□□□□ 0.55
CHAMP1Q96JM3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.46■□□□□ 0.55
CHAMP1Q96JM3 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.46■□□□□ 0.55
CHAMP1Q96JM3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.46■□□□□ 0.55
CHAMP1Q96JM3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.46■□□□□ 0.55
CHAMP1Q96JM3 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.46■□□□□ 0.55
CHAMP1Q96JM3 AL691403.2-201ENST00000618460 490 ntBASIC18.46■□□□□ 0.55
CHAMP1Q96JM3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.46■□□□□ 0.55
CHAMP1Q96JM3 AC005912.2-201ENST00000619492 2400 ntBASIC18.46■□□□□ 0.55
CHAMP1Q96JM3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHAMP1Q96JM3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHAMP1Q96JM3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC18.46■□□□□ 0.55
CHAMP1Q96JM3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHAMP1Q96JM3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC18.46■□□□□ 0.55
CHAMP1Q96JM3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
CHAMP1Q96JM3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
CHAMP1Q96JM3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHAMP1Q96JM3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.46■□□□□ 0.55
CHAMP1Q96JM3 REXO1L1P-202ENST00000608646 1974 ntBASIC18.46■□□□□ 0.55
CHAMP1Q96JM3 AC023024.2-201ENST00000623561 1993 ntBASIC18.46■□□□□ 0.55
CHAMP1Q96JM3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CHAMP1Q96JM3 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CHAMP1Q96JM3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CHAMP1Q96JM3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.45■□□□□ 0.54
CHAMP1Q96JM3 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHAMP1Q96JM3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHAMP1Q96JM3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CHAMP1Q96JM3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHAMP1Q96JM3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.45■□□□□ 0.54
CHAMP1Q96JM3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC18.45■□□□□ 0.54
CHAMP1Q96JM3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHAMP1Q96JM3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.45■□□□□ 0.54
CHAMP1Q96JM3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.45■□□□□ 0.54
CHAMP1Q96JM3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.45■□□□□ 0.54
CHAMP1Q96JM3 AC099522.2-201ENST00000607001 744 ntBASIC18.45■□□□□ 0.54
CHAMP1Q96JM3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CHAMP1Q96JM3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.45■□□□□ 0.54
CHAMP1Q96JM3 AL691432.1-201ENST00000596308 1422 ntBASIC18.45■□□□□ 0.54
CHAMP1Q96JM3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC18.45■□□□□ 0.54
CHAMP1Q96JM3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CHAMP1Q96JM3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.45■□□□□ 0.54
CHAMP1Q96JM3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHAMP1Q96JM3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHAMP1Q96JM3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHAMP1Q96JM3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.45■□□□□ 0.54
CHAMP1Q96JM3 PMS2P7-201ENST00000506558 1336 ntBASIC18.45■□□□□ 0.54
CHAMP1Q96JM3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHAMP1Q96JM3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHAMP1Q96JM3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.45■□□□□ 0.54
CHAMP1Q96JM3 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHAMP1Q96JM3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHAMP1Q96JM3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHAMP1Q96JM3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHAMP1Q96JM3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.44■□□□□ 0.54
CHAMP1Q96JM3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHAMP1Q96JM3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CHAMP1Q96JM3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.44■□□□□ 0.54
CHAMP1Q96JM3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHAMP1Q96JM3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
CHAMP1Q96JM3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CHAMP1Q96JM3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CHAMP1Q96JM3 AJ011931.1-201ENST00000618749 2492 ntBASIC18.44■□□□□ 0.54
CHAMP1Q96JM3 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC18.44■□□□□ 0.54
CHAMP1Q96JM3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC18.44■□□□□ 0.54
CHAMP1Q96JM3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CHAMP1Q96JM3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHAMP1Q96JM3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms