Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CPNE2Q96FN4 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CPNE2Q96FN4 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CPNE2Q96FN4 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
CPNE2Q96FN4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CPNE2Q96FN4 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.91□□□□□ -0.18
CPNE2Q96FN4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CPNE2Q96FN4 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CPNE2Q96FN4 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CPNE2Q96FN4 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CPNE2Q96FN4 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CPNE2Q96FN4 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.91□□□□□ -0.18
CPNE2Q96FN4 AC073347.1-201ENST00000421633 2643 ntBASIC13.91□□□□□ -0.18
CPNE2Q96FN4 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CPNE2Q96FN4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CPNE2Q96FN4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CPNE2Q96FN4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.91□□□□□ -0.18
CPNE2Q96FN4 RHOQP3-201ENST00000437982 621 ntBASIC13.91□□□□□ -0.18
CPNE2Q96FN4 AC140658.5-201ENST00000438532 169 ntBASIC13.91□□□□□ -0.18
CPNE2Q96FN4 UNC93B7-201ENST00000509439 705 ntBASIC13.91□□□□□ -0.18
CPNE2Q96FN4 AL662844.1-201ENST00000546340 181 ntBASIC13.91□□□□□ -0.18
CPNE2Q96FN4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.91□□□□□ -0.18
CPNE2Q96FN4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.91□□□□□ -0.18
CPNE2Q96FN4 AC010507.1-201ENST00000633895 436 ntBASIC13.91□□□□□ -0.18
CPNE2Q96FN4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CPNE2Q96FN4 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CPNE2Q96FN4 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CPNE2Q96FN4 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CPNE2Q96FN4 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CPNE2Q96FN4 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CPNE2Q96FN4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.91□□□□□ -0.18
CPNE2Q96FN4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CPNE2Q96FN4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CPNE2Q96FN4 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CPNE2Q96FN4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.91□□□□□ -0.18
CPNE2Q96FN4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.91□□□□□ -0.18
CPNE2Q96FN4 C8orf49-201ENST00000525043 1968 ntBASIC13.91□□□□□ -0.18
CPNE2Q96FN4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CPNE2Q96FN4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPNE2Q96FN4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPNE2Q96FN4 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
CPNE2Q96FN4 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CPNE2Q96FN4 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CPNE2Q96FN4 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CPNE2Q96FN4 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CPNE2Q96FN4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPNE2Q96FN4 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CPNE2Q96FN4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.9□□□□□ -0.18
CPNE2Q96FN4 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.9□□□□□ -0.18
CPNE2Q96FN4 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPNE2Q96FN4 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.9□□□□□ -0.18
CPNE2Q96FN4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPNE2Q96FN4 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.9□□□□□ -0.18
CPNE2Q96FN4 AC092474.2-201ENST00000424288 719 ntBASIC13.9□□□□□ -0.18
CPNE2Q96FN4 AC009947.1-201ENST00000444350 727 ntBASIC13.9□□□□□ -0.18
CPNE2Q96FN4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CPNE2Q96FN4 HCG4B-203ENST00000450128 991 ntBASIC13.9□□□□□ -0.18
CPNE2Q96FN4 AC079776.4-201ENST00000511039 504 ntBASIC13.9□□□□□ -0.18
CPNE2Q96FN4 PRYP6-201ENST00000514804 343 ntBASIC13.9□□□□□ -0.18
CPNE2Q96FN4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CPNE2Q96FN4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.9□□□□□ -0.18
CPNE2Q96FN4 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.9□□□□□ -0.18
CPNE2Q96FN4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.9□□□□□ -0.18
CPNE2Q96FN4 AC016027.1-202ENST00000607927 1699 ntBASIC13.9□□□□□ -0.18
CPNE2Q96FN4 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPNE2Q96FN4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.9□□□□□ -0.18
CPNE2Q96FN4 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPNE2Q96FN4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CPNE2Q96FN4 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.9□□□□□ -0.18
CPNE2Q96FN4 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPNE2Q96FN4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
CPNE2Q96FN4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPNE2Q96FN4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.9□□□□□ -0.18
CPNE2Q96FN4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.9□□□□□ -0.18
CPNE2Q96FN4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPNE2Q96FN4 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
CPNE2Q96FN4 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CPNE2Q96FN4 WASH6P-202ENST00000359512 1437 ntBASIC13.9□□□□□ -0.19
CPNE2Q96FN4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
CPNE2Q96FN4 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE2Q96FN4 PRAL-201ENST00000624952 3286 ntBASIC13.89□□□□□ -0.19
CPNE2Q96FN4 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE2Q96FN4 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE2Q96FN4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE2Q96FN4 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CPNE2Q96FN4 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE2Q96FN4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE2Q96FN4 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE2Q96FN4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE2Q96FN4 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.89□□□□□ -0.19
CPNE2Q96FN4 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE2Q96FN4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE2Q96FN4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.89□□□□□ -0.19
CPNE2Q96FN4 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE2Q96FN4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE2Q96FN4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE2Q96FN4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.89□□□□□ -0.19
CPNE2Q96FN4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE2Q96FN4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CPNE2Q96FN4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms